Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 KRT8P17-201ENST00000453110 1448 ntBASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 AC069544.1-201ENST00000609399 999 ntBASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 KRT8P20-201ENST00000423953 1409 ntBASIC19.85■□□□□ 0.77
PCDHB1Q9Y5F3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 AL391422.3-201ENST00000603791 2761 ntBASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB1Q9Y5F3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 HLA-G-202ENST00000376815 851 ntBASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 HLA-G-203ENST00000376818 1127 ntBASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 AC023632.3-201ENST00000521633 145 ntBASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHB1Q9Y5F3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB1Q9Y5F3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 AC211429.1-201ENST00000415277 523 ntBASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB1Q9Y5F3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 AC112907.3-201ENST00000577781 2400 ntBASIC19.81■□□□□ 0.76
PCDHB1Q9Y5F3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms