Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CTDP1Q9Y5B0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.98■■□□□ 1.27
CTDP1Q9Y5B0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.98■■□□□ 1.27
CTDP1Q9Y5B0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CTDP1Q9Y5B0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 LINC01023-201ENST00000606054 436 ntBASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 AC073195.1-201ENST00000607241 877 ntBASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
CTDP1Q9Y5B0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 FAM197Y1-201ENST00000421178 764 ntBASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.96■■□□□ 1.27
CTDP1Q9Y5B0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDP1Q9Y5B0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 AL355075.4-201ENST00000554988 638 ntBASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 AP003071.4-201ENST00000562276 1284 ntBASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.94■■□□□ 1.26
CTDP1Q9Y5B0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTDP1Q9Y5B0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 AC133561.5-201ENST00000635547 218 ntBASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CTDP1Q9Y5B0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms