Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 Z82202.1-201ENST00000623446 1880 ntBASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERGIC3Q9Y282 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 AL133373.2-201ENST00000623187 2828 ntBASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 AC105233.4-201ENST00000642045 216 ntBASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 DPP3P2-201ENST00000416030 1696 ntBASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERGIC3Q9Y282 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 AC245052.3-201ENST00000450182 901 ntBASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 AC233992.3-201ENST00000607491 485 ntBASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 AC018470.1-201ENST00000624790 3129 ntBASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERGIC3Q9Y282 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 RARRES2P11-201ENST00000635158 484 ntBASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 AL390961.4-201ENST00000623958 2535 ntBASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 AC116050.2-201ENST00000612102 1779 ntBASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 BX119927.1-201ENST00000636596 1552 ntBASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERGIC3Q9Y282 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.03■□□□□ 0.48
ERGIC3Q9Y282 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERGIC3Q9Y282 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.03■□□□□ 0.48
ERGIC3Q9Y282 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERGIC3Q9Y282 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERGIC3Q9Y282 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms