Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 AL512408.1-201ENST00000569378 2000 ntBASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.63■□□□□ 0.89
PPARGC1AQ9UBK2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 UNC93B4-201ENST00000505679 747 ntBASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPARGC1AQ9UBK2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.61■□□□□ 0.89
PPARGC1AQ9UBK2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 SOX15-203ENST00000570788 1093 ntBASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms