Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL512408.1-201ENST00000569378 2000 ntBASIC22.53■■□□□ 1.2
COL20A1Q9P218 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL20A1Q9P218 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 AP003071.4-201ENST00000562276 1284 ntBASIC22.52■■□□□ 1.2
COL20A1Q9P218 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 AC073195.1-201ENST00000607241 877 ntBASIC22.52■■□□□ 1.2
COL20A1Q9P218 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL20A1Q9P218 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL20A1Q9P218 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.52■■□□□ 1.19
COL20A1Q9P218 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.19
COL20A1Q9P218 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
COL20A1Q9P218 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.51■■□□□ 1.19
COL20A1Q9P218 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL20A1Q9P218 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL20A1Q9P218 AC211429.1-201ENST00000415277 523 ntBASIC22.51■■□□□ 1.19
COL20A1Q9P218 ECEL1P3-201ENST00000427961 737 ntBASIC22.51■■□□□ 1.19
COL20A1Q9P218 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL20A1Q9P218 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
COL20A1Q9P218 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.51■■□□□ 1.19
COL20A1Q9P218 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL20A1Q9P218 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL20A1Q9P218 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL20A1Q9P218 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.5■■□□□ 1.19
COL20A1Q9P218 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL20A1Q9P218 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 AP002982.1-201ENST00000492365 877 ntBASIC22.5■■□□□ 1.19
COL20A1Q9P218 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.5■■□□□ 1.19
COL20A1Q9P218 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.5■■□□□ 1.19
COL20A1Q9P218 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.5■■□□□ 1.19
COL20A1Q9P218 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.5■■□□□ 1.19
COL20A1Q9P218 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
COL20A1Q9P218 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL20A1Q9P218 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
COL20A1Q9P218 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.49■■□□□ 1.19
COL20A1Q9P218 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.49■■□□□ 1.19
COL20A1Q9P218 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.49■■□□□ 1.19
COL20A1Q9P218 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.49■■□□□ 1.19
COL20A1Q9P218 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 NIFKP9-201ENST00000419265 221 ntBASIC22.49■■□□□ 1.19
COL20A1Q9P218 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.49■■□□□ 1.19
COL20A1Q9P218 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL20A1Q9P218 FEM1AP1-201ENST00000431297 1995 ntBASIC22.49■■□□□ 1.19
COL20A1Q9P218 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
COL20A1Q9P218 C1QL1P1-201ENST00000568105 661 ntBASIC22.48■■□□□ 1.19
COL20A1Q9P218 AC092667.1-201ENST00000434301 2586 ntBASIC22.48■■□□□ 1.19
COL20A1Q9P218 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL20A1Q9P218 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms