Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 AC009237.14-201ENST00000609975 1594 ntBASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM248Q9NWD8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM248Q9NWD8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 PRORSD1P-201ENST00000295112 541 ntBASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM248Q9NWD8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 TMEM179-206ENST00000616017 1645 ntBASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 PRKY-204ENST00000533551 1019 ntBASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM248Q9NWD8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM248Q9NWD8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM248Q9NWD8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms