Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AP001271.2-201ENST00000624018 1556 ntBASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.22■■□□□ 1.47
ECHDC1Q9NTX5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ECHDC1Q9NTX5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
ECHDC1Q9NTX5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
ECHDC1Q9NTX5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
ECHDC1Q9NTX5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
ECHDC1Q9NTX5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
ECHDC1Q9NTX5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 TFP1-202ENST00000475455 1573 ntBASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.19■■□□□ 1.46
ECHDC1Q9NTX5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 AL121829.2-201ENST00000620908 328 ntBASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ECHDC1Q9NTX5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 POU5F1P3-201ENST00000428824 1078 ntBASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 AC233263.1-201ENST00000578059 224 ntBASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 AL121906.2-201ENST00000621597 723 ntBASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ECHDC1Q9NTX5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms