Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 AC073314.1-201ENST00000568729 2216 ntBASIC20.6■□□□□ 0.89
RNF38Q9H0F5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 MIR4785-201ENST00000585005 73 ntBASIC20.6■□□□□ 0.89
RNF38Q9H0F5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 AC073912.3-201ENST00000624414 853 ntBASIC20.6■□□□□ 0.89
RNF38Q9H0F5 AC018553.1-201ENST00000616682 1458 ntBASIC20.6■□□□□ 0.89
RNF38Q9H0F5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF38Q9H0F5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 AC020907.5-201ENST00000624372 1936 ntBASIC20.59■□□□□ 0.89
RNF38Q9H0F5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 FAM197Y1-201ENST00000421178 764 ntBASIC20.59■□□□□ 0.89
RNF38Q9H0F5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 AL355075.4-201ENST00000554988 638 ntBASIC20.59■□□□□ 0.89
RNF38Q9H0F5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 CD177P1-201ENST00000606252 935 ntBASIC20.59■□□□□ 0.89
RNF38Q9H0F5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RNF38Q9H0F5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 BX088651.1-201ENST00000540551 451 ntBASIC20.58■□□□□ 0.89
RNF38Q9H0F5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF38Q9H0F5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 AP006587.1-201ENST00000534129 1502 ntBASIC20.58■□□□□ 0.88
RNF38Q9H0F5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF38Q9H0F5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 AL353807.1-201ENST00000427475 662 ntBASIC20.57■□□□□ 0.88
RNF38Q9H0F5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF38Q9H0F5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 AC211429.1-201ENST00000415277 523 ntBASIC20.56■□□□□ 0.88
RNF38Q9H0F5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 AC073195.1-201ENST00000607241 877 ntBASIC20.56■□□□□ 0.88
RNF38Q9H0F5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 AC026471.5-201ENST00000615068 467 ntBASIC20.56■□□□□ 0.88
RNF38Q9H0F5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms