Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 IER3-202ENST00000376377 1350 ntBASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 CLEC4GP1-201ENST00000596555 870 ntBASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE2OQ9C0C9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 AC023632.3-201ENST00000521633 145 ntBASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE2OQ9C0C9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 TSPY5P-201ENST00000426936 936 ntBASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
UBE2OQ9C0C9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBE2OQ9C0C9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBE2OQ9C0C9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.89■■□□□ 1.1
UBE2OQ9C0C9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBE2OQ9C0C9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 INGX-201ENST00000359239 846 ntBASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 FAM86EP-206ENST00000510506 987 ntBASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 AL121956.5-201ENST00000625261 221 ntBASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBE2OQ9C0C9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE2OQ9C0C9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms