Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 TSPY6P-201ENST00000448518 926 ntBASIC18.23■□□□□ 0.51
TRIM2Q9C040 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 AC023632.3-201ENST00000521633 145 ntBASIC18.23■□□□□ 0.51
TRIM2Q9C040 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM2Q9C040 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM2Q9C040 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 LSM12P1-201ENST00000411836 588 ntBASIC18.22■□□□□ 0.51
TRIM2Q9C040 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 AC142086.2-201ENST00000569753 217 ntBASIC18.22■□□□□ 0.51
TRIM2Q9C040 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 KRT17P1-201ENST00000399211 1546 ntBASIC18.22■□□□□ 0.51
TRIM2Q9C040 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM2Q9C040 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM2Q9C040 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 AC009237.14-201ENST00000609975 1594 ntBASIC18.21■□□□□ 0.51
TRIM2Q9C040 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM2Q9C040 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM2Q9C040 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM2Q9C040 GUSBP6-202ENST00000438529 1198 ntBASIC18.21■□□□□ 0.51
TRIM2Q9C040 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM2Q9C040 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM2Q9C040 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM2Q9C040 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM2Q9C040 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM2Q9C040 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.21■□□□□ 0.5
TRIM2Q9C040 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM2Q9C040 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 AC125437.2-201ENST00000625180 2167 ntBASIC18.2■□□□□ 0.5
TRIM2Q9C040 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM2Q9C040 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM2Q9C040 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM2Q9C040 AF201337.1-201ENST00000520239 748 ntBASIC18.2■□□□□ 0.5
TRIM2Q9C040 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms