Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 AL691432.2-201ENST00000607222 2038 ntBASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 ITM2C-210ENST00000620962 501 ntBASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 PHGDH-210ENST00000641115 1638 ntBASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 AC124283.5-201ENST00000624661 1809 ntBASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2Q9BSQ5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 AC006058.3-201ENST00000606217 1069 ntBASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 TCF3P1-201ENST00000423021 1937 ntBASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2Q9BSQ5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.52■□□□□ 0.71
CCM2Q9BSQ5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
CCM2Q9BSQ5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
CCM2Q9BSQ5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CCM2Q9BSQ5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CCM2Q9BSQ5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.52■□□□□ 0.71
CCM2Q9BSQ5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 KRT18P29-201ENST00000397031 1267 ntBASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 AC112907.3-201ENST00000577781 2400 ntBASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.51■□□□□ 0.71
CCM2Q9BSQ5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms