Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.64■■□□□ 1.86
ABCA3Q99758 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC26.64■■□□□ 1.86
ABCA3Q99758 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ABCA3Q99758 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.85
ABCA3Q99758 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ABCA3Q99758 KRT18P38-201ENST00000449496 1282 ntBASIC26.64■■□□□ 1.85
ABCA3Q99758 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC26.64■■□□□ 1.85
ABCA3Q99758 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC26.64■■□□□ 1.85
ABCA3Q99758 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC26.64■■□□□ 1.85
ABCA3Q99758 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.64■■□□□ 1.85
ABCA3Q99758 GUSBP5-202ENST00000510805 1989 ntBASIC26.64■■□□□ 1.85
ABCA3Q99758 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.63■■□□□ 1.85
ABCA3Q99758 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA3Q99758 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC26.63■■□□□ 1.85
ABCA3Q99758 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC26.63■■□□□ 1.85
ABCA3Q99758 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC26.63■■□□□ 1.85
ABCA3Q99758 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
ABCA3Q99758 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA3Q99758 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA3Q99758 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.63■■□□□ 1.85
ABCA3Q99758 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA3Q99758 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.62■■□□□ 1.85
ABCA3Q99758 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.62■■□□□ 1.85
ABCA3Q99758 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA3Q99758 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26.62■■□□□ 1.85
ABCA3Q99758 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
ABCA3Q99758 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC26.62■■□□□ 1.85
ABCA3Q99758 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
ABCA3Q99758 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA3Q99758 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.62■■□□□ 1.85
ABCA3Q99758 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA3Q99758 TFP1-202ENST00000475455 1573 ntBASIC26.62■■□□□ 1.85
ABCA3Q99758 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
ABCA3Q99758 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.62■■□□□ 1.85
ABCA3Q99758 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA3Q99758 AC004951.3-201ENST00000418645 1148 ntBASIC26.62■■□□□ 1.85
ABCA3Q99758 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC26.62■■□□□ 1.85
ABCA3Q99758 Z85996.1-201ENST00000494644 937 ntBASIC26.62■■□□□ 1.85
ABCA3Q99758 AL441883.1-201ENST00000566170 1045 ntBASIC26.62■■□□□ 1.85
ABCA3Q99758 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.62■■□□□ 1.85
ABCA3Q99758 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC26.62■■□□□ 1.85
ABCA3Q99758 AL023973.1-201ENST00000624619 620 ntBASIC26.62■■□□□ 1.85
ABCA3Q99758 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
ABCA3Q99758 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
ABCA3Q99758 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.61■■□□□ 1.85
ABCA3Q99758 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.61■■□□□ 1.85
ABCA3Q99758 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA3Q99758 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA3Q99758 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA3Q99758 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
ABCA3Q99758 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
ABCA3Q99758 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA3Q99758 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA3Q99758 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC26.6■■□□□ 1.85
ABCA3Q99758 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
ABCA3Q99758 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC26.6■■□□□ 1.85
ABCA3Q99758 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.6■■□□□ 1.85
ABCA3Q99758 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.6■■□□□ 1.85
ABCA3Q99758 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC26.6■■□□□ 1.85
ABCA3Q99758 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
ABCA3Q99758 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC26.6■■□□□ 1.85
ABCA3Q99758 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 KRT8P17-201ENST00000453110 1448 ntBASIC26.6■■□□□ 1.85
ABCA3Q99758 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA3Q99758 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
ABCA3Q99758 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA3Q99758 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA3Q99758 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA3Q99758 TUBB8P6-201ENST00000436895 1288 ntBASIC26.59■■□□□ 1.85
ABCA3Q99758 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA3Q99758 AC116562.4-202ENST00000641738 218 ntBASIC26.59■■□□□ 1.85
ABCA3Q99758 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA3Q99758 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA3Q99758 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA3Q99758 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
ABCA3Q99758 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
ABCA3Q99758 PP7080-204ENST00000510714 601 ntTSL 3 BASIC26.59■■□□□ 1.85
ABCA3Q99758 AC130371.2-201ENST00000619443 611 ntBASIC26.59■■□□□ 1.85
ABCA3Q99758 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA3Q99758 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA3Q99758 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA3Q99758 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA3Q99758 SLC25A1P2-201ENST00000430693 912 ntBASIC26.58■■□□□ 1.85
ABCA3Q99758 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.58■■□□□ 1.85
ABCA3Q99758 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC26.58■■□□□ 1.85
ABCA3Q99758 AC018553.1-201ENST00000616682 1458 ntBASIC26.58■■□□□ 1.85
ABCA3Q99758 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC26.58■■□□□ 1.85
ABCA3Q99758 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA3Q99758 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
ABCA3Q99758 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA3Q99758 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC26.57■■□□□ 1.84
ABCA3Q99758 AC092338.2-201ENST00000568827 1415 ntBASIC26.57■■□□□ 1.84
ABCA3Q99758 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms