Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.21■□□□□ 0.67
CDC6Q99741 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
CDC6Q99741 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC6Q99741 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CDC6Q99741 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CDC6Q99741 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC6Q99741 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC6Q99741 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC6Q99741 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC6Q99741 EP400NL-214ENST00000641289 2402 ntBASIC19.21■□□□□ 0.67
CDC6Q99741 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.21■□□□□ 0.67
CDC6Q99741 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC6Q99741 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC6Q99741 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.2■□□□□ 0.66
CDC6Q99741 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDC6Q99741 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC6Q99741 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDC6Q99741 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 CRYGFP-201ENST00000418459 633 ntBASIC19.2■□□□□ 0.66
CDC6Q99741 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.2■□□□□ 0.66
CDC6Q99741 B3GAT3P1-201ENST00000471720 806 ntBASIC19.2■□□□□ 0.66
CDC6Q99741 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.2■□□□□ 0.66
CDC6Q99741 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.2■□□□□ 0.66
CDC6Q99741 AC131212.4-201ENST00000623606 975 ntBASIC19.2■□□□□ 0.66
CDC6Q99741 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 PTBP1P-201ENST00000554374 1601 ntBASIC19.2■□□□□ 0.66
CDC6Q99741 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC6Q99741 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC6Q99741 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC6Q99741 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.19■□□□□ 0.66
CDC6Q99741 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDC6Q99741 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDC6Q99741 AC022616.7-201ENST00000525383 220 ntBASIC19.19■□□□□ 0.66
CDC6Q99741 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC6Q99741 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDC6Q99741 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CDC6Q99741 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC6Q99741 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CDC6Q99741 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.18■□□□□ 0.66
CDC6Q99741 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDC6Q99741 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC6Q99741 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.18■□□□□ 0.66
CDC6Q99741 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.18■□□□□ 0.66
CDC6Q99741 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDC6Q99741 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 AC063952.2-201ENST00000498792 1227 ntBASIC19.18■□□□□ 0.66
CDC6Q99741 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDC6Q99741 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDC6Q99741 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDC6Q99741 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDC6Q99741 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDC6Q99741 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC6Q99741 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC6Q99741 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC6Q99741 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC6Q99741 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC6Q99741 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC6Q99741 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC6Q99741 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDC6Q99741 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC6Q99741 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDC6Q99741 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC6Q99741 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC6Q99741 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC6Q99741 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC6Q99741 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC6Q99741 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC6Q99741 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.17■□□□□ 0.66
CDC6Q99741 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms