Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 AC233702.5-201ENST00000584107 538 ntBASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP1Q96SZ6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 RPS2P55-201ENST00000397318 883 ntBASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 YBX1P10-201ENST00000444752 975 ntBASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 AC107956.1-201ENST00000494359 873 ntBASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 AP001271.2-201ENST00000624018 1556 ntBASIC20.59■□□□□ 0.89
CDK5RAP1Q96SZ6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP1Q96SZ6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP1Q96SZ6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP1Q96SZ6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.58■□□□□ 0.88
CDK5RAP1Q96SZ6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.58■□□□□ 0.88
CDK5RAP1Q96SZ6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.58■□□□□ 0.88
CDK5RAP1Q96SZ6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.58■□□□□ 0.88
CDK5RAP1Q96SZ6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP1Q96SZ6 AL162377.1-201ENST00000618844 1793 ntBASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms