Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 SLC25A1P4-201ENST00000567977 778 ntBASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 AP000692.2-201ENST00000608391 879 ntBASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 AC116562.4-202ENST00000641738 218 ntBASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 TUBB8P6-201ENST00000436895 1288 ntBASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 CCR12P-201ENST00000446203 998 ntBASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN4Q96NY8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 AC091390.4-202ENST00000476426 537 ntBASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 KRT18P16-201ENST00000510337 1294 ntBASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 AC130371.2-201ENST00000619443 611 ntBASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN4Q96NY8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 AL031133.1-201ENST00000406807 723 ntBASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 AL138966.2-201ENST00000621997 464 ntBASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN4Q96NY8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.58■□□□□ 0.88
NECTIN4Q96NY8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NECTIN4Q96NY8 AC121338.2-201ENST00000622535 1744 ntBASIC20.58■□□□□ 0.88
NECTIN4Q96NY8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
NECTIN4Q96NY8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.58■□□□□ 0.88
NECTIN4Q96NY8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NECTIN4Q96NY8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 GUSBP5-202ENST00000510805 1989 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 INGX-201ENST00000359239 846 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 SLC25A1P2-201ENST00000430693 912 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 AC092647.4-201ENST00000457211 535 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 KRT18P56-201ENST00000507275 550 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 AC116351.2-201ENST00000606540 1585 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 AC139887.4-201ENST00000607877 719 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 AP000550.4-202ENST00000639755 178 ntBASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms