Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 NIFKP9-201ENST00000419265 221 ntBASIC19.94■□□□□ 0.78
SIPA1Q96FS4 RBM17P1-201ENST00000453646 1190 ntBASIC19.94■□□□□ 0.78
SIPA1Q96FS4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.94■□□□□ 0.78
SIPA1Q96FS4 AC007225.1-201ENST00000566331 1836 ntBASIC19.94■□□□□ 0.78
SIPA1Q96FS4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SIPA1Q96FS4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 AP006587.1-201ENST00000534129 1502 ntBASIC19.93■□□□□ 0.78
SIPA1Q96FS4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 UNC93B2-201ENST00000285383 730 ntBASIC19.93■□□□□ 0.78
SIPA1Q96FS4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.93■□□□□ 0.78
SIPA1Q96FS4 KRT16P6-202ENST00000425692 1426 ntBASIC19.93■□□□□ 0.78
SIPA1Q96FS4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 KRT16P1-201ENST00000399124 1418 ntBASIC19.92■□□□□ 0.78
SIPA1Q96FS4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.92■□□□□ 0.78
SIPA1Q96FS4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 AC079598.2-202ENST00000546624 1451 ntBASIC19.91■□□□□ 0.78
SIPA1Q96FS4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIPA1Q96FS4 AC026310.3-201ENST00000625186 2373 ntBASIC19.91■□□□□ 0.78
SIPA1Q96FS4 AC092720.2-201ENST00000602388 1665 ntBASIC19.91■□□□□ 0.78
SIPA1Q96FS4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 LINC00565-201ENST00000562710 2331 ntBASIC19.9■□□□□ 0.78
SIPA1Q96FS4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 RCN1P1-201ENST00000400413 996 ntBASIC19.9■□□□□ 0.78
SIPA1Q96FS4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 AP000525.1-201ENST00000608286 694 ntBASIC19.9■□□□□ 0.78
SIPA1Q96FS4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
SIPA1Q96FS4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIPA1Q96FS4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIPA1Q96FS4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms