Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX1Q92499 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX1Q92499 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX1Q92499 TREX1-205ENST00000625293 1783 ntBASIC21.16■□□□□ 0.98
DDX1Q92499 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX1Q92499 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX1Q92499 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX1Q92499 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX1Q92499 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX1Q92499 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX1Q92499 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX1Q92499 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
DDX1Q92499 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX1Q92499 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX1Q92499 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DDX1Q92499 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DDX1Q92499 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX1Q92499 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX1Q92499 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX1Q92499 UNC93B4-201ENST00000505679 747 ntBASIC21.15■□□□□ 0.98
DDX1Q92499 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX1Q92499 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX1Q92499 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX1Q92499 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.15■□□□□ 0.98
DDX1Q92499 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DDX1Q92499 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX1Q92499 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
DDX1Q92499 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX1Q92499 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.14■□□□□ 0.98
DDX1Q92499 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.14■□□□□ 0.98
DDX1Q92499 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDX1Q92499 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX1Q92499 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DDX1Q92499 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX1Q92499 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX1Q92499 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DDX1Q92499 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DDX1Q92499 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX1Q92499 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX1Q92499 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX1Q92499 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX1Q92499 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX1Q92499 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX1Q92499 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX1Q92499 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX1Q92499 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX1Q92499 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX1Q92499 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DDX1Q92499 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
DDX1Q92499 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX1Q92499 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX1Q92499 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 PHGDH-210ENST00000641115 1638 ntBASIC21.13■□□□□ 0.97
DDX1Q92499 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
DDX1Q92499 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DDX1Q92499 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX1Q92499 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX1Q92499 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX1Q92499 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX1Q92499 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX1Q92499 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX1Q92499 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
DDX1Q92499 AP001271.2-201ENST00000624018 1556 ntBASIC21.12■□□□□ 0.97
DDX1Q92499 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.12■□□□□ 0.97
DDX1Q92499 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX1Q92499 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.12■□□□□ 0.97
DDX1Q92499 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.12■□□□□ 0.97
DDX1Q92499 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX1Q92499 AC005829.2-201ENST00000571422 1056 ntBASIC21.12■□□□□ 0.97
DDX1Q92499 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX1Q92499 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX1Q92499 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX1Q92499 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX1Q92499 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX1Q92499 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX1Q92499 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX1Q92499 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX1Q92499 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX1Q92499 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX1Q92499 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX1Q92499 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX1Q92499 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX1Q92499 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX1Q92499 FAM210CP-201ENST00000445714 574 ntBASIC21.11■□□□□ 0.97
DDX1Q92499 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms