Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 GABARAPL3-202ENST00000624044 1851 ntBASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 MIR718-201ENST00000390190 70 ntBASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 AFG3L1P-217ENST00000557444 2447 ntBASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDND2Q8NHS1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 AL049796.1-201ENST00000565336 1766 ntBASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 AL020996.1-203ENST00000536896 2307 ntBASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 MIR2861-201ENST00000636310 90 ntBASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDND2Q8NHS1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDND2Q8NHS1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 MTDHP1-201ENST00000605323 784 ntBASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDND2Q8NHS1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDND2Q8NHS1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms