Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST3Q8N1M1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 AL031963.3-201ENST00000606441 850 ntBASIC18.41■□□□□ 0.54
BEST3Q8N1M1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST3Q8N1M1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 KRT8P20-201ENST00000423953 1409 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AC007225.1-201ENST00000566331 1836 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 RPS2P55-201ENST00000397318 883 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AC012618.2-201ENST00000428058 849 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AC107956.1-201ENST00000494359 873 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AC233702.5-201ENST00000584107 538 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 AL121906.2-201ENST00000621597 723 ntBASIC18.4■□□□□ 0.54
BEST3Q8N1M1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.4■□□□□ 0.54
BEST3Q8N1M1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BEST3Q8N1M1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BEST3Q8N1M1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST3Q8N1M1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 DPP3P2-201ENST00000416030 1696 ntBASIC18.38■□□□□ 0.53
BEST3Q8N1M1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms