Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 HLA-G-202ENST00000376815 851 ntBASIC20.35■□□□□ 0.85
SIX5Q8N196 HLA-G-203ENST00000376818 1127 ntBASIC20.35■□□□□ 0.85
SIX5Q8N196 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SIX5Q8N196 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SIX5Q8N196 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.35■□□□□ 0.85
SIX5Q8N196 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SIX5Q8N196 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX5Q8N196 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX5Q8N196 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX5Q8N196 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SIX5Q8N196 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SIX5Q8N196 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.34■□□□□ 0.85
SIX5Q8N196 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.34■□□□□ 0.85
SIX5Q8N196 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
SIX5Q8N196 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 CRYGFP-201ENST00000418459 633 ntBASIC20.34■□□□□ 0.85
SIX5Q8N196 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.34■□□□□ 0.85
SIX5Q8N196 AC026271.3-201ENST00000571884 352 ntBASIC20.34■□□□□ 0.85
SIX5Q8N196 FAM87A-204ENST00000613235 858 ntBASIC20.34■□□□□ 0.85
SIX5Q8N196 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
SIX5Q8N196 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.34■□□□□ 0.85
SIX5Q8N196 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.34■□□□□ 0.85
SIX5Q8N196 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX5Q8N196 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.34■□□□□ 0.85
SIX5Q8N196 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX5Q8N196 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX5Q8N196 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.33■□□□□ 0.85
SIX5Q8N196 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX5Q8N196 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX5Q8N196 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX5Q8N196 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SIX5Q8N196 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.33■□□□□ 0.85
SIX5Q8N196 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.33■□□□□ 0.85
SIX5Q8N196 AC097488.1-201ENST00000507834 756 ntBASIC20.33■□□□□ 0.85
SIX5Q8N196 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.33■□□□□ 0.85
SIX5Q8N196 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.33■□□□□ 0.85
SIX5Q8N196 DGCR10-201ENST00000609839 495 ntBASIC20.33■□□□□ 0.85
SIX5Q8N196 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.33■□□□□ 0.85
SIX5Q8N196 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
SIX5Q8N196 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.32■□□□□ 0.84
SIX5Q8N196 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SIX5Q8N196 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX5Q8N196 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.32■□□□□ 0.84
SIX5Q8N196 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.32■□□□□ 0.84
SIX5Q8N196 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX5Q8N196 INGX-201ENST00000359239 846 ntBASIC20.32■□□□□ 0.84
SIX5Q8N196 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX5Q8N196 AC117947.1-201ENST00000427448 529 ntBASIC20.32■□□□□ 0.84
SIX5Q8N196 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SIX5Q8N196 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX5Q8N196 B3GAT3P1-201ENST00000471720 806 ntBASIC20.32■□□□□ 0.84
SIX5Q8N196 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.32■□□□□ 0.84
SIX5Q8N196 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.32■□□□□ 0.84
SIX5Q8N196 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIX5Q8N196 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.32■□□□□ 0.84
SIX5Q8N196 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX5Q8N196 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.32■□□□□ 0.84
SIX5Q8N196 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.32■□□□□ 0.84
SIX5Q8N196 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX5Q8N196 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SIX5Q8N196 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.31■□□□□ 0.84
SIX5Q8N196 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX5Q8N196 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.31■□□□□ 0.84
SIX5Q8N196 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX5Q8N196 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.31■□□□□ 0.84
SIX5Q8N196 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX5Q8N196 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SIX5Q8N196 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX5Q8N196 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX5Q8N196 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX5Q8N196 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX5Q8N196 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIX5Q8N196 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX5Q8N196 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms