Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 AC239809.2-201ENST00000415381 517 ntBASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 RPPH1-201ENST00000516869 333 ntBASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 PRKY-204ENST00000533551 1019 ntBASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 AL359736.2-201ENST00000621992 437 ntBASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 TFP1-202ENST00000475455 1573 ntBASIC18.34■□□□□ 0.53
C9orf40Q8IXQ3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf40Q8IXQ3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 AC142381.4-202ENST00000563973 229 ntBASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 AC124016.1-201ENST00000609552 612 ntBASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf40Q8IXQ3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 KRASP1-201ENST00000407852 552 ntBASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 AL158047.1-201ENST00000445918 881 ntBASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
C9orf40Q8IXQ3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms