Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 TERF1P2-201ENST00000583350 1212 ntBASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 KRT8P17-201ENST00000453110 1448 ntBASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 AC004854.2-201ENST00000608450 1441 ntBASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM1Q86UE6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 CYP21A1P-202ENST00000354927 1481 ntBASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 AC142381.2-201ENST00000566120 298 ntBASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 LINC01465-201ENST00000408887 1940 ntBASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRTM1Q86UE6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms