Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TSPY5P-201ENST00000426936 936 ntBASIC13.88□□□□□ -0.19
CSMD3Q7Z407 PVRIG2P-201ENST00000435460 978 ntBASIC13.88□□□□□ -0.19
CSMD3Q7Z407 AC083849.1-201ENST00000615227 514 ntBASIC13.88□□□□□ -0.19
CSMD3Q7Z407 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 KRT8P10-201ENST00000450021 1447 ntBASIC13.88□□□□□ -0.19
CSMD3Q7Z407 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 AP000347.1-202ENST00000435868 847 ntBASIC13.88□□□□□ -0.19
CSMD3Q7Z407 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 AC096733.2-201ENST00000609937 1394 ntBASIC13.87□□□□□ -0.19
CSMD3Q7Z407 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 AL671883.3-201ENST00000603274 991 ntBASIC13.87□□□□□ -0.19
CSMD3Q7Z407 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.87□□□□□ -0.19
CSMD3Q7Z407 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD3Q7Z407 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 CLEC4GP1-201ENST00000596555 870 ntBASIC13.86□□□□□ -0.19
CSMD3Q7Z407 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.86□□□□□ -0.19
CSMD3Q7Z407 AC023511.2-201ENST00000618803 211 ntBASIC13.86□□□□□ -0.19
CSMD3Q7Z407 AC005229.4-201ENST00000610085 2198 ntBASIC13.86□□□□□ -0.19
CSMD3Q7Z407 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 AL023803.3-201ENST00000615559 522 ntBASIC13.86□□□□□ -0.19
CSMD3Q7Z407 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD3Q7Z407 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 MYB-221ENST00000527615 2381 ntTSL 5 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 LINC01238-205ENST00000567549 1107 ntBASIC13.85□□□□□ -0.19
CSMD3Q7Z407 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms