Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRNP1Q6NT89 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
TRNP1Q6NT89 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRNP1Q6NT89 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.7■□□□□ 0.9
TRNP1Q6NT89 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRNP1Q6NT89 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 TFP1-202ENST00000475455 1573 ntBASIC20.68■□□□□ 0.9
TRNP1Q6NT89 AP001271.2-201ENST00000624018 1556 ntBASIC20.68■□□□□ 0.9
TRNP1Q6NT89 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 AC233263.1-201ENST00000578059 224 ntBASIC20.68■□□□□ 0.9
TRNP1Q6NT89 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.68■□□□□ 0.9
TRNP1Q6NT89 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 TREX1-205ENST00000625293 1783 ntBASIC20.67■□□□□ 0.9
TRNP1Q6NT89 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRNP1Q6NT89 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms