Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL596275.1-201ENST00000423464 877 ntBASIC18.55■□□□□ 0.56
SMSP52788 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.55■□□□□ 0.56
SMSP52788 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.55■□□□□ 0.56
SMSP52788 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.55■□□□□ 0.56
SMSP52788 CDV3P1-201ENST00000471403 739 ntBASIC18.55■□□□□ 0.56
SMSP52788 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.55■□□□□ 0.56
SMSP52788 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMSP52788 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMSP52788 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMSP52788 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SMSP52788 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SMSP52788 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.54■□□□□ 0.56
SMSP52788 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.54■□□□□ 0.56
SMSP52788 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SMSP52788 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.54■□□□□ 0.56
SMSP52788 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.54■□□□□ 0.56
SMSP52788 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.54■□□□□ 0.56
SMSP52788 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.54■□□□□ 0.56
SMSP52788 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMSP52788 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.53■□□□□ 0.56
SMSP52788 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.53■□□□□ 0.56
SMSP52788 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMSP52788 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.53■□□□□ 0.56
SMSP52788 MIR718-201ENST00000390190 70 ntBASIC18.53■□□□□ 0.56
SMSP52788 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMSP52788 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.53■□□□□ 0.56
SMSP52788 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.53■□□□□ 0.56
SMSP52788 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.53■□□□□ 0.56
SMSP52788 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.53■□□□□ 0.56
SMSP52788 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMSP52788 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.53■□□□□ 0.56
SMSP52788 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMSP52788 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMSP52788 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.52■□□□□ 0.56
SMSP52788 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.52■□□□□ 0.56
SMSP52788 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMSP52788 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.52■□□□□ 0.56
SMSP52788 AC008550.1-201ENST00000511500 884 ntBASIC18.52■□□□□ 0.56
SMSP52788 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.52■□□□□ 0.56
SMSP52788 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.52■□□□□ 0.56
SMSP52788 FAM21FP-204ENST00000608637 956 ntBASIC18.52■□□□□ 0.56
SMSP52788 AC100791.3-201ENST00000617619 330 ntBASIC18.52■□□□□ 0.56
SMSP52788 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.52■□□□□ 0.56
SMSP52788 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.52■□□□□ 0.56
SMSP52788 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMSP52788 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.52■□□□□ 0.55
SMSP52788 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMSP52788 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.51■□□□□ 0.55
SMSP52788 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.51■□□□□ 0.55
SMSP52788 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.51■□□□□ 0.55
SMSP52788 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.51■□□□□ 0.55
SMSP52788 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.51■□□□□ 0.55
SMSP52788 AC060766.5-201ENST00000590539 871 ntBASIC18.51■□□□□ 0.55
SMSP52788 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.51■□□□□ 0.55
SMSP52788 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SMSP52788 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SMSP52788 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMSP52788 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SMSP52788 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SMSP52788 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMSP52788 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMSP52788 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms