Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNF144AP50876 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF144AP50876 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF144AP50876 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF144AP50876 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF144AP50876 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF144AP50876 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.42■□□□□ 0.54
RNF144AP50876 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF144AP50876 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF144AP50876 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF144AP50876 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF144AP50876 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF144AP50876 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF144AP50876 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RNF144AP50876 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF144AP50876 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF144AP50876 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF144AP50876 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
RNF144AP50876 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 AL158211.5-201ENST00000623583 2518 ntBASIC18.41■□□□□ 0.54
RNF144AP50876 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF144AP50876 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF144AP50876 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF144AP50876 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF144AP50876 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
RNF144AP50876 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF144AP50876 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF144AP50876 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF144AP50876 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF144AP50876 AC125437.2-201ENST00000625180 2167 ntBASIC18.4■□□□□ 0.54
RNF144AP50876 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF144AP50876 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF144AP50876 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF144AP50876 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF144AP50876 AC104771.1-201ENST00000603335 964 ntBASIC18.4■□□□□ 0.54
RNF144AP50876 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF144AP50876 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF144AP50876 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF144AP50876 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF144AP50876 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF144AP50876 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF144AP50876 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF144AP50876 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF144AP50876 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
RNF144AP50876 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.39■□□□□ 0.54
RNF144AP50876 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.39■□□□□ 0.54
RNF144AP50876 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF144AP50876 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 RNF165-205ENST00000588679 2904 ntBASIC18.39■□□□□ 0.53
RNF144AP50876 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 AL355802.2-201ENST00000402069 882 ntBASIC18.39■□□□□ 0.53
RNF144AP50876 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF144AP50876 HLA-L-209ENST00000420110 1011 ntBASIC18.39■□□□□ 0.53
RNF144AP50876 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF144AP50876 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF144AP50876 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.39■□□□□ 0.53
RNF144AP50876 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF144AP50876 KRT8P17-201ENST00000453110 1448 ntBASIC18.39■□□□□ 0.53
RNF144AP50876 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF144AP50876 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF144AP50876 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF144AP50876 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms