Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRP9P49458 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.56■□□□□ 0.4
SRP9P49458 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SRP9P49458 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.56■□□□□ 0.4
SRP9P49458 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.56■□□□□ 0.4
SRP9P49458 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.56■□□□□ 0.4
SRP9P49458 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SRP9P49458 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SRP9P49458 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
SRP9P49458 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SRP9P49458 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SRP9P49458 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.56■□□□□ 0.4
SRP9P49458 AC091799.1-201ENST00000422823 811 ntBASIC17.56■□□□□ 0.4
SRP9P49458 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.56■□□□□ 0.4
SRP9P49458 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.56■□□□□ 0.4
SRP9P49458 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.56■□□□□ 0.4
SRP9P49458 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.56■□□□□ 0.4
SRP9P49458 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRP9P49458 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.55■□□□□ 0.4
SRP9P49458 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 LETM1P2-201ENST00000597330 2178 ntBASIC17.55■□□□□ 0.4
SRP9P49458 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.55■□□□□ 0.4
SRP9P49458 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.55■□□□□ 0.4
SRP9P49458 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SRP9P49458 CNN2P6-201ENST00000439038 900 ntBASIC17.55■□□□□ 0.4
SRP9P49458 CDCA4P2-201ENST00000441182 718 ntBASIC17.55■□□□□ 0.4
SRP9P49458 AC008694.1-202ENST00000636953 945 ntBASIC17.55■□□□□ 0.4
SRP9P49458 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SRP9P49458 AC116050.2-201ENST00000612102 1779 ntBASIC17.55■□□□□ 0.4
SRP9P49458 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SRP9P49458 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SRP9P49458 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.55■□□□□ 0.4
SRP9P49458 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.55■□□□□ 0.4
SRP9P49458 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.55■□□□□ 0.4
SRP9P49458 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRP9P49458 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.54■□□□□ 0.4
SRP9P49458 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SRP9P49458 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.54■□□□□ 0.4
SRP9P49458 AC007322.3-201ENST00000426526 701 ntBASIC17.54■□□□□ 0.4
SRP9P49458 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.54■□□□□ 0.4
SRP9P49458 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.54■□□□□ 0.4
SRP9P49458 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SRP9P49458 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.54■□□□□ 0.4
SRP9P49458 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.54■□□□□ 0.4
SRP9P49458 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 AC069236.1-201ENST00000604339 616 ntBASIC17.54■□□□□ 0.4
SRP9P49458 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.54■□□□□ 0.4
SRP9P49458 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SRP9P49458 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.54■□□□□ 0.4
SRP9P49458 AC092720.2-201ENST00000602388 1665 ntBASIC17.54■□□□□ 0.4
SRP9P49458 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRP9P49458 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SRP9P49458 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.54■□□□□ 0.4
SRP9P49458 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
SRP9P49458 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SRP9P49458 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
SRP9P49458 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
SRP9P49458 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.53■□□□□ 0.4
SRP9P49458 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.53■□□□□ 0.4
SRP9P49458 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRP9P49458 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.53■□□□□ 0.4
SRP9P49458 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms