Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.42■□□□□ 0.38
CX3CR1P49238 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CX3CR1P49238 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.42■□□□□ 0.38
CX3CR1P49238 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 KRT8P20-201ENST00000423953 1409 ntBASIC17.42■□□□□ 0.38
CX3CR1P49238 KRT16P6-202ENST00000425692 1426 ntBASIC17.42■□□□□ 0.38
CX3CR1P49238 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.42■□□□□ 0.38
CX3CR1P49238 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 AC093787.1-201ENST00000450396 207 ntBASIC17.42■□□□□ 0.38
CX3CR1P49238 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.42■□□□□ 0.38
CX3CR1P49238 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CX3CR1P49238 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.42■□□□□ 0.38
CX3CR1P49238 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.42■□□□□ 0.38
CX3CR1P49238 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CX3CR1P49238 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.41■□□□□ 0.38
CX3CR1P49238 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.41■□□□□ 0.38
CX3CR1P49238 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.41■□□□□ 0.38
CX3CR1P49238 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.41■□□□□ 0.38
CX3CR1P49238 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.41■□□□□ 0.38
CX3CR1P49238 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.41■□□□□ 0.38
CX3CR1P49238 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.41■□□□□ 0.38
CX3CR1P49238 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CX3CR1P49238 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.41■□□□□ 0.38
CX3CR1P49238 AC080038.1-201ENST00000611274 1154 ntBASIC17.41■□□□□ 0.38
CX3CR1P49238 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.41■□□□□ 0.38
CX3CR1P49238 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CX3CR1P49238 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CR1P49238 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CX3CR1P49238 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.4■□□□□ 0.38
CX3CR1P49238 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.4■□□□□ 0.38
CX3CR1P49238 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.4■□□□□ 0.38
CX3CR1P49238 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 AL158211.5-201ENST00000623583 2518 ntBASIC17.4■□□□□ 0.38
CX3CR1P49238 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 AL512625.2-201ENST00000417533 625 ntBASIC17.4■□□□□ 0.38
CX3CR1P49238 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 IKBKGP1-201ENST00000612193 1073 ntBASIC17.4■□□□□ 0.38
CX3CR1P49238 AC092437.1-201ENST00000624794 1048 ntBASIC17.4■□□□□ 0.38
CX3CR1P49238 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.4■□□□□ 0.38
CX3CR1P49238 KRT17P1-201ENST00000399211 1546 ntBASIC17.4■□□□□ 0.38
CX3CR1P49238 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
CX3CR1P49238 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.4■□□□□ 0.38
CX3CR1P49238 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.4■□□□□ 0.38
CX3CR1P49238 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CX3CR1P49238 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CX3CR1P49238 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CX3CR1P49238 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CX3CR1P49238 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CX3CR1P49238 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CX3CR1P49238 HLA-G-202ENST00000376815 851 ntBASIC17.39■□□□□ 0.37
CX3CR1P49238 HLA-G-203ENST00000376818 1127 ntBASIC17.39■□□□□ 0.37
CX3CR1P49238 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.39■□□□□ 0.37
CX3CR1P49238 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.39■□□□□ 0.37
CX3CR1P49238 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.39■□□□□ 0.37
CX3CR1P49238 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.39■□□□□ 0.37
CX3CR1P49238 AC073111.5-205ENST00000641717 521 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms