Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC011558.1-201ENST00000623459 338 ntBASIC34.29■■■■□ 3.08
CFTRP13569 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC34.29■■■■□ 3.08
CFTRP13569 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFTRP13569 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFTRP13569 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFTRP13569 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CFTRP13569 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC34.28■■■■□ 3.08
CFTRP13569 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC34.28■■■■□ 3.08
CFTRP13569 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
CFTRP13569 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CFTRP13569 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CFTRP13569 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
CFTRP13569 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC34.27■■■■□ 3.08
CFTRP13569 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CFTRP13569 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CFTRP13569 AC004951.3-201ENST00000418645 1148 ntBASIC34.27■■■■□ 3.08
CFTRP13569 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC34.27■■■■□ 3.08
CFTRP13569 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CFTRP13569 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC34.27■■■■□ 3.08
CFTRP13569 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CFTRP13569 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CFTRP13569 TUBB8P6-201ENST00000436895 1288 ntBASIC34.27■■■■□ 3.08
CFTRP13569 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC34.27■■■■□ 3.08
CFTRP13569 CD81-212ENST00000526072 1172 ntTSL 5 BASIC34.27■■■■□ 3.08
CFTRP13569 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC34.27■■■■□ 3.08
CFTRP13569 CYGB-204ENST00000589342 815 ntTSL 3 BASIC34.27■■■■□ 3.08
CFTRP13569 CLEC4GP1-201ENST00000596555 870 ntBASIC34.27■■■■□ 3.08
CFTRP13569 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC34.27■■■■□ 3.08
CFTRP13569 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC34.26■■■■□ 3.08
CFTRP13569 GUSBP5-202ENST00000510805 1989 ntBASIC34.26■■■■□ 3.08
CFTRP13569 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
CFTRP13569 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC34.26■■■■□ 3.07
CFTRP13569 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC34.25■■■■□ 3.07
CFTRP13569 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CFTRP13569 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFTRP13569 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.07
CFTRP13569 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC34.25■■■■□ 3.07
CFTRP13569 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFTRP13569 GOLGA6L3-201ENST00000507199 1679 ntBASIC34.25■■■■□ 3.07
CFTRP13569 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC34.25■■■■□ 3.07
CFTRP13569 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CFTRP13569 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC34.25■■■■□ 3.07
CFTRP13569 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC34.25■■■■□ 3.07
CFTRP13569 Z85996.1-201ENST00000494644 937 ntBASIC34.25■■■■□ 3.07
CFTRP13569 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC34.25■■■■□ 3.07
CFTRP13569 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFTRP13569 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC34.24■■■■□ 3.07
CFTRP13569 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC34.24■■■■□ 3.07
CFTRP13569 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFTRP13569 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFTRP13569 HOMER2P1-201ENST00000455653 964 ntBASIC34.24■■■■□ 3.07
CFTRP13569 GXYLT1P6-201ENST00000456472 1187 ntBASIC34.24■■■■□ 3.07
CFTRP13569 AL671277.2-201ENST00000458060 996 ntBASIC34.24■■■■□ 3.07
CFTRP13569 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC34.24■■■■□ 3.07
CFTRP13569 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC34.24■■■■□ 3.07
CFTRP13569 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFTRP13569 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CFTRP13569 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC34.24■■■■□ 3.07
CFTRP13569 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC34.24■■■■□ 3.07
CFTRP13569 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CFTRP13569 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC34.23■■■■□ 3.07
CFTRP13569 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
CFTRP13569 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC34.23■■■■□ 3.07
CFTRP13569 HCG4P8-203ENST00000443049 980 ntBASIC34.23■■■■□ 3.07
CFTRP13569 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC34.23■■■■□ 3.07
CFTRP13569 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC34.23■■■■□ 3.07
CFTRP13569 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC34.23■■■■□ 3.07
CFTRP13569 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC34.23■■■■□ 3.07
CFTRP13569 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFTRP13569 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
CFTRP13569 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CFTRP13569 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
CFTRP13569 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFTRP13569 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFTRP13569 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFTRP13569 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC34.22■■■■□ 3.07
CFTRP13569 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC34.22■■■■□ 3.07
CFTRP13569 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC34.22■■■■□ 3.07
CFTRP13569 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC34.22■■■■□ 3.07
CFTRP13569 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC34.22■■■■□ 3.07
CFTRP13569 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
CFTRP13569 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFTRP13569 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC34.22■■■■□ 3.07
CFTRP13569 AC244015.2-201ENST00000616358 1861 ntBASIC34.22■■■■□ 3.07
CFTRP13569 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC34.21■■■■□ 3.07
CFTRP13569 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
CFTRP13569 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC34.21■■■■□ 3.07
CFTRP13569 AL441883.1-201ENST00000566170 1045 ntBASIC34.21■■■■□ 3.07
CFTRP13569 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
CFTRP13569 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC34.21■■■■□ 3.07
CFTRP13569 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
CFTRP13569 AL121603.2-201ENST00000557373 2117 ntBASIC34.21■■■■□ 3.07
CFTRP13569 AC018553.1-201ENST00000616682 1458 ntBASIC34.21■■■■□ 3.07
CFTRP13569 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
CFTRP13569 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC34.21■■■■□ 3.07
CFTRP13569 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC34.21■■■■□ 3.07
CFTRP13569 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
CFTRP13569 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
CFTRP13569 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC34.2■■■■□ 3.07
CFTRP13569 AL359075.1-203ENST00000462729 1002 ntBASIC34.2■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms