Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCNAP12004 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCNAP12004 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.29■□□□□ 0.68
PCNAP12004 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCNAP12004 BX119927.1-201ENST00000636596 1552 ntBASIC19.29■□□□□ 0.68
PCNAP12004 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.29■□□□□ 0.68
PCNAP12004 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCNAP12004 BX276092.2-201ENST00000417668 665 ntBASIC19.29■□□□□ 0.68
PCNAP12004 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.29■□□□□ 0.68
PCNAP12004 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.29■□□□□ 0.68
PCNAP12004 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCNAP12004 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.29■□□□□ 0.68
PCNAP12004 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PCNAP12004 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCNAP12004 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.29■□□□□ 0.68
PCNAP12004 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCNAP12004 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCNAP12004 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCNAP12004 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCNAP12004 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCNAP12004 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PCNAP12004 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCNAP12004 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PCNAP12004 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCNAP12004 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.28■□□□□ 0.68
PCNAP12004 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCNAP12004 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.28■□□□□ 0.68
PCNAP12004 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.28■□□□□ 0.68
PCNAP12004 C2orf69P4-201ENST00000565394 541 ntBASIC19.28■□□□□ 0.68
PCNAP12004 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.28■□□□□ 0.68
PCNAP12004 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 AL121832.2-201ENST00000610979 668 ntBASIC19.28■□□□□ 0.68
PCNAP12004 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.28■□□□□ 0.68
PCNAP12004 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PCNAP12004 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
PCNAP12004 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCNAP12004 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCNAP12004 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCNAP12004 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCNAP12004 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
PCNAP12004 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.27■□□□□ 0.68
PCNAP12004 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.27■□□□□ 0.68
PCNAP12004 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.27■□□□□ 0.68
PCNAP12004 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.27■□□□□ 0.68
PCNAP12004 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
PCNAP12004 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.27■□□□□ 0.68
PCNAP12004 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.27■□□□□ 0.68
PCNAP12004 AC083906.2-201ENST00000511578 360 ntBASIC19.27■□□□□ 0.68
PCNAP12004 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.27■□□□□ 0.68
PCNAP12004 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.27■□□□□ 0.68
PCNAP12004 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.27■□□□□ 0.68
PCNAP12004 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.27■□□□□ 0.68
PCNAP12004 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCNAP12004 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.27■□□□□ 0.68
PCNAP12004 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCNAP12004 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCNAP12004 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCNAP12004 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.27■□□□□ 0.67
PCNAP12004 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCNAP12004 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PCNAP12004 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.27■□□□□ 0.67
PCNAP12004 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.26■□□□□ 0.67
PCNAP12004 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCNAP12004 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.26■□□□□ 0.67
PCNAP12004 PTBP1P-201ENST00000554374 1601 ntBASIC19.26■□□□□ 0.67
PCNAP12004 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.26■□□□□ 0.67
PCNAP12004 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCNAP12004 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCNAP12004 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCNAP12004 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCNAP12004 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCNAP12004 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCNAP12004 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.26■□□□□ 0.67
PCNAP12004 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PCNAP12004 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.26■□□□□ 0.67
PCNAP12004 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.26■□□□□ 0.67
PCNAP12004 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.26■□□□□ 0.67
PCNAP12004 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms