Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOC1P02654 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.51■□□□□ 0.39
APOC1P02654 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.5■□□□□ 0.39
APOC1P02654 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.5■□□□□ 0.39
APOC1P02654 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
APOC1P02654 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
APOC1P02654 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.5■□□□□ 0.39
APOC1P02654 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.5■□□□□ 0.39
APOC1P02654 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.5■□□□□ 0.39
APOC1P02654 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
APOC1P02654 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.5■□□□□ 0.39
APOC1P02654 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.5■□□□□ 0.39
APOC1P02654 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
APOC1P02654 TMEM179-206ENST00000616017 1645 ntBASIC17.5■□□□□ 0.39
APOC1P02654 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC1P02654 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
APOC1P02654 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.49■□□□□ 0.39
APOC1P02654 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
APOC1P02654 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.49■□□□□ 0.39
APOC1P02654 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
APOC1P02654 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.49■□□□□ 0.39
APOC1P02654 CYP2T1P-201ENST00000432607 1285 ntBASIC17.49■□□□□ 0.39
APOC1P02654 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
APOC1P02654 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
APOC1P02654 AL589743.5-201ENST00000616611 1050 ntBASIC17.49■□□□□ 0.39
APOC1P02654 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.49■□□□□ 0.39
APOC1P02654 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
APOC1P02654 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
APOC1P02654 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
APOC1P02654 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
APOC1P02654 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.49■□□□□ 0.39
APOC1P02654 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
APOC1P02654 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
APOC1P02654 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOC1P02654 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
APOC1P02654 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 KRT16P6-202ENST00000425692 1426 ntBASIC17.48■□□□□ 0.39
APOC1P02654 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.48■□□□□ 0.39
APOC1P02654 HLA-G-202ENST00000376815 851 ntBASIC17.48■□□□□ 0.39
APOC1P02654 HLA-G-203ENST00000376818 1127 ntBASIC17.48■□□□□ 0.39
APOC1P02654 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.48■□□□□ 0.39
APOC1P02654 AL512625.2-201ENST00000417533 625 ntBASIC17.48■□□□□ 0.39
APOC1P02654 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.48■□□□□ 0.39
APOC1P02654 CYP2T3P-201ENST00000601990 817 ntBASIC17.48■□□□□ 0.39
APOC1P02654 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.48■□□□□ 0.39
APOC1P02654 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.48■□□□□ 0.39
APOC1P02654 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.48■□□□□ 0.39
APOC1P02654 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOC1P02654 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.48■□□□□ 0.39
APOC1P02654 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.48■□□□□ 0.39
APOC1P02654 AC112907.3-201ENST00000577781 2400 ntBASIC17.48■□□□□ 0.39
APOC1P02654 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
APOC1P02654 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.47■□□□□ 0.39
APOC1P02654 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 KRT8P17-201ENST00000453110 1448 ntBASIC17.47■□□□□ 0.39
APOC1P02654 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.47■□□□□ 0.39
APOC1P02654 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.47■□□□□ 0.39
APOC1P02654 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC1P02654 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.47■□□□□ 0.39
APOC1P02654 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms