Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.83■□□□□ 0.93
TRUB2O95900 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.83■□□□□ 0.93
TRUB2O95900 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.83■□□□□ 0.93
TRUB2O95900 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB2O95900 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.83■□□□□ 0.92
TRUB2O95900 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB2O95900 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRUB2O95900 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.82■□□□□ 0.92
TRUB2O95900 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.82■□□□□ 0.92
TRUB2O95900 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.82■□□□□ 0.92
TRUB2O95900 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.82■□□□□ 0.92
TRUB2O95900 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRUB2O95900 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRUB2O95900 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.82■□□□□ 0.92
TRUB2O95900 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.82■□□□□ 0.92
TRUB2O95900 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRUB2O95900 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRUB2O95900 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRUB2O95900 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRUB2O95900 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
TRUB2O95900 POU5F1P3-201ENST00000428824 1078 ntBASIC20.81■□□□□ 0.92
TRUB2O95900 AC008687.6-201ENST00000596318 630 ntBASIC20.81■□□□□ 0.92
TRUB2O95900 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.81■□□□□ 0.92
TRUB2O95900 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 TMEM179-206ENST00000616017 1645 ntBASIC20.81■□□□□ 0.92
TRUB2O95900 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRUB2O95900 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.8■□□□□ 0.92
TRUB2O95900 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.8■□□□□ 0.92
TRUB2O95900 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.8■□□□□ 0.92
TRUB2O95900 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.8■□□□□ 0.92
TRUB2O95900 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.8■□□□□ 0.92
TRUB2O95900 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 AC120498.8-201ENST00000614275 531 ntBASIC20.8■□□□□ 0.92
TRUB2O95900 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.8■□□□□ 0.92
TRUB2O95900 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.8■□□□□ 0.92
TRUB2O95900 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRUB2O95900 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.79■□□□□ 0.92
TRUB2O95900 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRUB2O95900 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.79■□□□□ 0.92
TRUB2O95900 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRUB2O95900 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.79■□□□□ 0.92
TRUB2O95900 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRUB2O95900 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.79■□□□□ 0.92
TRUB2O95900 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.79■□□□□ 0.92
TRUB2O95900 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRUB2O95900 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.79■□□□□ 0.92
TRUB2O95900 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.79■□□□□ 0.92
TRUB2O95900 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.79■□□□□ 0.92
TRUB2O95900 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRUB2O95900 AC125437.2-201ENST00000625180 2167 ntBASIC20.79■□□□□ 0.92
TRUB2O95900 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.79■□□□□ 0.92
TRUB2O95900 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms