Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX3O60493 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX3O60493 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX3O60493 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SNX3O60493 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX3O60493 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX3O60493 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX3O60493 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SNX3O60493 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SNX3O60493 KRT16P2-201ENST00000414673 1423 ntBASIC19.55■□□□□ 0.72
SNX3O60493 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SNX3O60493 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
SNX3O60493 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SNX3O60493 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 AC006333.2-201ENST00000607957 2099 ntBASIC19.55■□□□□ 0.72
SNX3O60493 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX3O60493 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX3O60493 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX3O60493 IGHV3-19-201ENST00000521488 291 ntBASIC19.54■□□□□ 0.72
SNX3O60493 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX3O60493 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX3O60493 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX3O60493 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX3O60493 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX3O60493 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SNX3O60493 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX3O60493 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX3O60493 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX3O60493 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 AC090164.3-201ENST00000610780 2143 ntBASIC19.53■□□□□ 0.72
SNX3O60493 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SNX3O60493 AC105233.4-201ENST00000642045 216 ntBASIC19.53■□□□□ 0.72
SNX3O60493 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
SNX3O60493 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX3O60493 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 AL161938.1-201ENST00000569833 2180 ntBASIC19.53■□□□□ 0.72
SNX3O60493 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX3O60493 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX3O60493 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX3O60493 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SNX3O60493 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SNX3O60493 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SNX3O60493 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX3O60493 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX3O60493 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX3O60493 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
SNX3O60493 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms