Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC110285.5-201ENST00000611501 352 ntBASIC17.91■□□□□ 0.46
ZIC3O60481 FAM197Y4-202ENST00000622692 608 ntBASIC17.91■□□□□ 0.46
ZIC3O60481 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
ZIC3O60481 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.9■□□□□ 0.46
ZIC3O60481 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.9■□□□□ 0.46
ZIC3O60481 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
ZIC3O60481 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.9■□□□□ 0.46
ZIC3O60481 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.9■□□□□ 0.46
ZIC3O60481 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ZIC3O60481 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
ZIC3O60481 AC066615.1-201ENST00000640911 628 ntBASIC17.9■□□□□ 0.46
ZIC3O60481 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ZIC3O60481 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.9■□□□□ 0.46
ZIC3O60481 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZIC3O60481 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ZIC3O60481 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.9■□□□□ 0.46
ZIC3O60481 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.89■□□□□ 0.46
ZIC3O60481 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ZIC3O60481 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
ZIC3O60481 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
ZIC3O60481 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZIC3O60481 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.89■□□□□ 0.45
ZIC3O60481 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.89■□□□□ 0.45
ZIC3O60481 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.89■□□□□ 0.45
ZIC3O60481 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.89■□□□□ 0.45
ZIC3O60481 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.89■□□□□ 0.45
ZIC3O60481 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.89■□□□□ 0.45
ZIC3O60481 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZIC3O60481 NBPF21P-201ENST00000425093 1451 ntBASIC17.88■□□□□ 0.45
ZIC3O60481 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ZIC3O60481 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.88■□□□□ 0.45
ZIC3O60481 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.88■□□□□ 0.45
ZIC3O60481 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.88■□□□□ 0.45
ZIC3O60481 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.88■□□□□ 0.45
ZIC3O60481 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ZIC3O60481 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZIC3O60481 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.88■□□□□ 0.45
ZIC3O60481 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZIC3O60481 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZIC3O60481 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZIC3O60481 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ZIC3O60481 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZIC3O60481 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
ZIC3O60481 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZIC3O60481 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.87■□□□□ 0.45
ZIC3O60481 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.87■□□□□ 0.45
ZIC3O60481 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.87■□□□□ 0.45
ZIC3O60481 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.87■□□□□ 0.45
ZIC3O60481 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.87■□□□□ 0.45
ZIC3O60481 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.87■□□□□ 0.45
ZIC3O60481 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZIC3O60481 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.87■□□□□ 0.45
ZIC3O60481 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.87■□□□□ 0.45
ZIC3O60481 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZIC3O60481 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.87■□□□□ 0.45
ZIC3O60481 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
ZIC3O60481 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZIC3O60481 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZIC3O60481 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms