Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1AO00555 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.85■□□□□ 0.61
CACNA1AO00555 NEK4P2-201ENST00000580004 1012 ntBASIC18.85■□□□□ 0.61
CACNA1AO00555 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AP001160.2-201ENST00000596071 487 ntBASIC18.85■□□□□ 0.61
CACNA1AO00555 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNA1AO00555 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1AO00555 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA1AO00555 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CACNA1AO00555 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1AO00555 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AC139530.1-201ENST00000575312 1977 ntBASIC18.85■□□□□ 0.61
CACNA1AO00555 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AC016734.2-201ENST00000624325 1377 ntBASIC18.85■□□□□ 0.61
CACNA1AO00555 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1AO00555 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1AO00555 AL121912.1-201ENST00000603683 238 ntBASIC18.85■□□□□ 0.61
CACNA1AO00555 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1AO00555 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1AO00555 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1AO00555 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CACNA1AO00555 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1AO00555 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1AO00555 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1AO00555 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA1AO00555 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1AO00555 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.84■□□□□ 0.61
CACNA1AO00555 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1AO00555 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA1AO00555 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1AO00555 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA1AO00555 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1AO00555 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1AO00555 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1AO00555 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.83■□□□□ 0.61
CACNA1AO00555 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1AO00555 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.83■□□□□ 0.61
CACNA1AO00555 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.83■□□□□ 0.61
CACNA1AO00555 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.83■□□□□ 0.61
CACNA1AO00555 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1AO00555 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CACNA1AO00555 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1AO00555 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA1AO00555 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA1AO00555 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA1AO00555 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA1AO00555 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.83■□□□□ 0.6
CACNA1AO00555 AC091304.2-201ENST00000564639 760 ntBASIC18.83■□□□□ 0.6
CACNA1AO00555 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CACNA1AO00555 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA1AO00555 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA1AO00555 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CACNA1AO00555 AC142381.3-201ENST00000568208 1670 ntBASIC18.83■□□□□ 0.6
CACNA1AO00555 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA1AO00555 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1AO00555 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1AO00555 AC245100.3-201ENST00000441281 285 ntBASIC18.82■□□□□ 0.6
CACNA1AO00555 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA1AO00555 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1AO00555 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1AO00555 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1AO00555 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA1AO00555 POLD2P1-201ENST00000511220 997 ntBASIC18.82■□□□□ 0.6
CACNA1AO00555 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CACNA1AO00555 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CACNA1AO00555 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA1AO00555 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA1AO00555 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CACNA1AO00555 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1AO00555 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.81■□□□□ 0.6
CACNA1AO00555 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.81■□□□□ 0.6
CACNA1AO00555 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CACNA1AO00555 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.81■□□□□ 0.6
CACNA1AO00555 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1AO00555 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms