Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN3O00409 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
FOXN3O00409 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXN3O00409 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.26■□□□□ 0.99
FOXN3O00409 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXN3O00409 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXN3O00409 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXN3O00409 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN3O00409 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXN3O00409 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN3O00409 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXN3O00409 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FOXN3O00409 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FOXN3O00409 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXN3O00409 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXN3O00409 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXN3O00409 AL138781.1-201ENST00000566567 1274 ntBASIC21.25■□□□□ 0.99
FOXN3O00409 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXN3O00409 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.25■□□□□ 0.99
FOXN3O00409 AP001271.2-201ENST00000624018 1556 ntBASIC21.25■□□□□ 0.99
FOXN3O00409 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
FOXN3O00409 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN3O00409 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXN3O00409 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXN3O00409 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXN3O00409 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXN3O00409 AC090192.1-201ENST00000517740 490 ntBASIC21.24■□□□□ 0.99
FOXN3O00409 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXN3O00409 MIR4758-201ENST00000577688 71 ntBASIC21.24■□□□□ 0.99
FOXN3O00409 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.24■□□□□ 0.99
FOXN3O00409 AC007952.6-201ENST00000573168 2673 ntBASIC21.24■□□□□ 0.99
FOXN3O00409 AC003957.1-201ENST00000625108 2673 ntBASIC21.24■□□□□ 0.99
FOXN3O00409 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
FOXN3O00409 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXN3O00409 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXN3O00409 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
FOXN3O00409 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
FOXN3O00409 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 AC116562.4-201ENST00000641316 2276 ntBASIC21.24■□□□□ 0.99
FOXN3O00409 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN3O00409 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXN3O00409 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.23■□□□□ 0.99
FOXN3O00409 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXN3O00409 AC098934.4-201ENST00000564127 592 ntBASIC21.23■□□□□ 0.99
FOXN3O00409 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.23■□□□□ 0.99
FOXN3O00409 MYC-209ENST00000641252 345 ntBASIC21.23■□□□□ 0.99
FOXN3O00409 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXN3O00409 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN3O00409 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXN3O00409 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
FOXN3O00409 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXN3O00409 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN3O00409 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN3O00409 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN3O00409 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
FOXN3O00409 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN3O00409 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN3O00409 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXN3O00409 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN3O00409 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXN3O00409 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms