Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CPSF4LA6NMK7 AC008694.1-202ENST00000636953 945 ntBASIC18.29■□□□□ 0.52
CPSF4LA6NMK7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF4LA6NMK7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.29■□□□□ 0.52
CPSF4LA6NMK7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF4LA6NMK7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF4LA6NMK7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 CYP2T3P-201ENST00000601990 817 ntBASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CPSF4LA6NMK7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 KRT16P6-202ENST00000425692 1426 ntBASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 AC007322.1-201ENST00000426983 750 ntBASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 AL162430.1-201ENST00000480705 870 ntBASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 AL031963.3-201ENST00000606441 850 ntBASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 AC231657.2-201ENST00000624556 255 ntBASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF4LA6NMK7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 TREX1-205ENST00000625293 1783 ntBASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CPSF4LA6NMK7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 KRT8P20-201ENST00000423953 1409 ntBASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF4LA6NMK7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF4LA6NMK7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms