Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 SOX15-203ENST00000570788 1093 ntBASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC120498.8-201ENST00000614275 531 ntBASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC196A0A1B0GTZ2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC196A0A1B0GTZ2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 RPS2P52-201ENST00000469610 820 ntBASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC008687.6-201ENST00000596318 630 ntBASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC196A0A1B0GTZ2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.08■■□□□ 1.28
CCDC196A0A1B0GTZ2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.28
CCDC196A0A1B0GTZ2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
CCDC196A0A1B0GTZ2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CCDC196A0A1B0GTZ2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 PCDHAC2-203ENST00000615316 3011 ntBASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 AC116351.2-201ENST00000606540 1585 ntBASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.07■■□□□ 1.28
CCDC196A0A1B0GTZ2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
CCDC196A0A1B0GTZ2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC196A0A1B0GTZ2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC196A0A1B0GTZ2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC196A0A1B0GTZ2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC196A0A1B0GTZ2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CCDC196A0A1B0GTZ2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
CCDC196A0A1B0GTZ2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 AC018553.1-201ENST00000616682 1458 ntBASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC196A0A1B0GTZ2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms