Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 API5P1-201ENST00000424316 1510 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AL117378.2-201ENST00000622916 1337 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 RNA5SP188-201ENST00000362916 129 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 RNA5SP474-201ENST00000391234 90 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 RNA5SP35-201ENST00000391257 129 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 EEF1GP6-201ENST00000402309 905 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 RANP7-201ENST00000418085 644 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 ELOBP4-201ENST00000423418 296 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 MTND1P10-201ENST00000426108 832 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC105391.1-201ENST00000503155 1045 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 RNU6-1334P-201ENST00000516032 105 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 OR52K3P-201ENST00000531655 943 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC106785.4-201ENST00000569492 412 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AL157899.1-201ENST00000604110 936 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC241377.1-201ENST00000619797 406 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AC005332.9-201ENST00000620266 2921 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 AL157831.2-201ENST00000564681 3095 ntBASIC5.78□□□□□ -1.48
RHBDD3Q9Y3P4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.77□□□□□ -1.48
RHBDD3Q9Y3P4 NEK2P2-201ENST00000438441 1338 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 OR5M2P-202ENST00000641241 4242 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 HSPD1P1-201ENST00000503199 1726 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 RNA5SP429-201ENST00000363688 109 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AL451061.1-201ENST00000407887 862 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AL139135.1-201ENST00000412675 209 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 NME1P1-201ENST00000420914 382 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 RPL23AP64-201ENST00000469465 435 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AC083906.1-201ENST00000509298 406 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AC026774.2-201ENST00000513990 1098 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 IGKV2D-38-201ENST00000518423 240 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 FCGR1CP-201ENST00000579737 1127 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 MIR4433B-201ENST00000581329 102 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AC091193.1-201ENST00000604640 448 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 MRPL57P3-201ENST00000619218 176 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 974.8 ms