Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 OXR1-212ENST00000521592 993 ntTSL 5 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AC079363.1-201ENST00000551366 1125 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 EIF4A1P9-201ENST00000576035 1207 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AC024614.1-201ENST00000577546 307 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AC096708.2-201ENST00000577676 512 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AP005119.2-201ENST00000579735 1105 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 OR51C1P-201ENST00000608504 942 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AL139123.1-201ENST00000612008 430 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 FKBP1AP4-201ENST00000631775 336 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 MTND5P42-201ENST00000637720 498 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AL512310.3-201ENST00000547023 1335 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 AL929601.4-201ENST00000613011 1341 ntBASIC10.79□□□□□ -0.68
PHF8Q9UPP1 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
PHF8Q9UPP1 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 EEF1A1P4-201ENST00000359165 1405 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 RN7SKP211-201ENST00000363328 315 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AL139100.1-201ENST00000408001 498 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC127537.1-201ENST00000418183 748 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 CYCSP46-201ENST00000423569 204 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 TUBBP11-201ENST00000472255 252 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 RN7SL861P-201ENST00000473793 285 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 RN7SL516P-201ENST00000496127 297 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC104090.1-201ENST00000506341 1171 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 RPS23-208ENST00000512493 443 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 UBE2V2P2-201ENST00000587677 504 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC000068.3-201ENST00000607934 427 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC011472.4-201ENST00000615848 491 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC004836.1-201ENST00000623032 634 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC007347.2-201ENST00000623044 180 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 SLC16A1P1-201ENST00000486743 1510 ntBASIC10.78□□□□□ -0.68
PHF8Q9UPP1 CAB39L-202ENST00000355854 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PHF8Q9UPP1 AC068044.1-201ENST00000441585 1978 ntBASIC10.77□□□□□ -0.68
PHF8Q9UPP1 AC136428.3-201ENST00000566387 1990 ntBASIC10.77□□□□□ -0.68
PHF8Q9UPP1 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC10.77□□□□□ -0.68
PHF8Q9UPP1 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
PHF8Q9UPP1 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC10.77□□□□□ -0.68
PHF8Q9UPP1 AC006026.1-201ENST00000444025 1803 ntBASIC10.77□□□□□ -0.68
PHF8Q9UPP1 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC10.77□□□□□ -0.69
PHF8Q9UPP1 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PHF8Q9UPP1 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PHF8Q9UPP1 Y_RNA.192-201ENST00000363977 102 ntBASIC10.77□□□□□ -0.69
PHF8Q9UPP1 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC10.77□□□□□ -0.69
PHF8Q9UPP1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PHF8Q9UPP1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PHF8Q9UPP1 DNAJA1P3-201ENST00000399417 1194 ntBASIC10.77□□□□□ -0.69
PHF8Q9UPP1 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC10.77□□□□□ -0.69
PHF8Q9UPP1 TPMTP3-201ENST00000411928 735 ntBASIC10.77□□□□□ -0.69
PHF8Q9UPP1 RPL21P108-201ENST00000413857 481 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms