Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
SCN11AQ9UI33 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SCN11AQ9UI33 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCN11AQ9UI33 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
SCN11AQ9UI33 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SCN11AQ9UI33 EIF3EP1-201ENST00000433978 1316 ntBASIC8.15□□□□□ -1.1
SCN11AQ9UI33 KARSP1-201ENST00000451871 1752 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 OR11H13P-201ENST00000359695 979 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 AL354890.1-201ENST00000413730 346 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 VDAC1P2-201ENST00000423609 850 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 AC023141.3-201ENST00000436698 278 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 ATP5LP2-201ENST00000440646 311 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 GAPDHP23-201ENST00000444823 993 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 MGAT2P1-201ENST00000449718 797 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 AC104109.1-201ENST00000498563 436 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 RN7SL284P-201ENST00000498823 275 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 SCARNA18.1-201ENST00000516330 83 ntBASIC8.15□□□□□ -1.11
SCN11AQ9UI33 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.15□□□□□ -1.11
SCN11AQ9UI33 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AL080317.3-201ENST00000607434 4315 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AC024651.2-201ENST00000562480 2098 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 SNORA43.1-201ENST00000364863 140 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 BX284632.2-201ENST00000421091 399 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 PPIAP10-201ENST00000438675 458 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AL512605.1-202ENST00000441919 381 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AL359955.2-201ENST00000445380 353 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 RPA2P3-201ENST00000533268 770 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 MIR6809-201ENST00000612189 116 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 CASC19-205ENST00000641013 1411 ntBASIC8.14□□□□□ -1.11
SCN11AQ9UI33 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
SCN11AQ9UI33 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 CYP2G2P-201ENST00000594920 1485 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 RBMY1HP-201ENST00000382759 1389 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 CDY17P-201ENST00000414121 1282 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 BX510359.3-201ENST00000422168 306 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 UBFD1P1-201ENST00000473259 814 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 MIR8089-201ENST00000620165 82 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC018659.2-201ENST00000624690 715 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC073488.3-201ENST00000631611 778 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms