Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.35□□□□□ -1.23
PPARGC1AQ9UBK2 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PPARGC1AQ9UBK2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.35□□□□□ -1.23
PPARGC1AQ9UBK2 AL031651.1-201ENST00000615357 1438 ntBASIC7.35□□□□□ -1.23
PPARGC1AQ9UBK2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AL359263.1-201ENST00000441188 2796 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC006600.2-201ENST00000624834 2506 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 SNORA11D-201ENST00000408548 128 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 SNORA11E-201ENST00000408778 128 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 RPL17P17-201ENST00000419491 557 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 RPL12P43-201ENST00000420608 499 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC008753.1-201ENST00000423096 284 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 GSTA6P-201ENST00000424144 582 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 ARL5AP3-201ENST00000439327 386 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 Z83846.1-201ENST00000446798 265 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 RPS4XP19-201ENST00000460237 736 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 TUBBP11-201ENST00000472255 252 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC104982.1-201ENST00000478775 574 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 PCNAP1-201ENST00000505363 709 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 RNU5A-7P-201ENST00000515979 116 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 NPM1P52-201ENST00000518264 846 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC010376.1-201ENST00000522101 334 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC104115.2-201ENST00000523026 687 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 OR5M6P-201ENST00000530227 937 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 UBTFL9-201ENST00000534504 1148 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 VN1R81P-201ENST00000602085 372 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AL121782.1-201ENST00000611242 413 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC025016.1-201ENST00000616746 682 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AL645927.2-201ENST00000618350 349 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 AL078595.3-201ENST00000623815 1166 ntBASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.34□□□□□ -1.23
PPARGC1AQ9UBK2 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
PPARGC1AQ9UBK2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
PPARGC1AQ9UBK2 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 AC107980.1-201ENST00000558671 3355 ntBASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 RNU6-1017P-201ENST00000363613 106 ntBASIC7.33□□□□□ -1.24
PPARGC1AQ9UBK2 RNA5SP114-201ENST00000363780 113 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms