Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SNX18Q96RF0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX18Q96RF0 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC005225.5-201ENST00000623547 2225 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 RSL24D1P1-201ENST00000404972 493 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AL358178.1-201ENST00000407698 397 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 RN7SKP271-201ENST00000410528 320 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AL512504.1-201ENST00000415494 778 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AJ239321.1-201ENST00000424255 564 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC093799.1-201ENST00000452411 499 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC135721.2-201ENST00000464237 300 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC008620.1-201ENST00000468453 592 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 RN7SL104P-201ENST00000498686 293 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 EEF1B2P2-201ENST00000519625 676 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 EGLN3P1-201ENST00000541727 720 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC016144.1-201ENST00000548175 1087 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 MIR4470-201ENST00000583453 72 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 PPATP2-201ENST00000605635 508 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 RN7SL778P-201ENST00000607160 297 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 AC016597.2-201ENST00000613256 341 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 U1.41-201ENST00000617626 165 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AL353763.1-201ENST00000624467 1628 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
SNX18Q96RF0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX18Q96RF0 AP000432.2-201ENST00000624164 2048 ntBASIC6.32□□□□□ -1.4
SNX18Q96RF0 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNX18Q96RF0 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.31□□□□□ -1.4
SNX18Q96RF0 TYMSP1-201ENST00000407851 869 ntBASIC6.31□□□□□ -1.4
SNX18Q96RF0 EEF1B2P8-201ENST00000414101 671 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms