Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 ARMC4P1-201ENST00000438905 707 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC092967.1-201ENST00000449016 481 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 RN7SL413P-201ENST00000482700 297 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC139713.1-202ENST00000512366 460 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 COX6B1P4-201ENST00000519826 484 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AP005639.1-201ENST00000526939 192 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC024267.2-201ENST00000582737 417 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC022001.1-201ENST00000605193 268 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AC006213.4-201ENST00000616184 634 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 AP003400.6-201ENST00000624698 740 ntBASIC6.89□□□□□ -1.31
LMO3Q8TAP4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
LMO3Q8TAP4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 GUCY1B2-204ENST00000531898 1979 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC068733.2-201ENST00000605434 1418 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 RN7SKP161-201ENST00000411110 305 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AL157884.1-201ENST00000424561 454 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 OR6R1P-201ENST00000431838 940 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 PPIAP32-201ENST00000449940 472 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 VN1R38P-201ENST00000450265 887 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AL034369.1-201ENST00000453808 477 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 RN7SL165P-201ENST00000477476 291 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 IGHV1-14-201ENST00000523391 241 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 SYPL1P2-201ENST00000582878 727 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC005899.6-201ENST00000620729 297 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 MIR6503-201ENST00000622884 86 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AC022726.2-201ENST00000634673 547 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 SAMMSON-214ENST00000641395 1264 ntBASIC6.88□□□□□ -1.31
LMO3Q8TAP4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
LMO3Q8TAP4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 AC098614.1-202ENST00000634895 1830 ntBASIC6.87□□□□□ -1.31
LMO3Q8TAP4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 AP003170.5-201ENST00000397185 335 ntBASIC6.87□□□□□ -1.31
LMO3Q8TAP4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LMO3Q8TAP4 GTF2IP14-201ENST00000441415 586 ntBASIC6.87□□□□□ -1.31
LMO3Q8TAP4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms