Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 STAG3L4-201ENST00000352103 530 ntBASIC5.39□□□□□ -1.55
LMO4P61968 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LMO4P61968 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LMO4P61968 RNA5SP115-201ENST00000411160 107 ntBASIC5.39□□□□□ -1.55
LMO4P61968 RPL23AP85-201ENST00000421838 433 ntBASIC5.39□□□□□ -1.55
LMO4P61968 FTH1P10-202ENST00000430907 550 ntBASIC5.39□□□□□ -1.55
LMO4P61968 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 TOMM20P1-201ENST00000534518 427 ntBASIC5.39□□□□□ -1.55
LMO4P61968 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.39□□□□□ -1.55
LMO4P61968 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.39□□□□□ -1.55
LMO4P61968 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 MIR4502-201ENST00000580432 81 ntBASIC5.39□□□□□ -1.55
LMO4P61968 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 AL136370.1-201ENST00000608166 691 ntBASIC5.39□□□□□ -1.55
LMO4P61968 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.39□□□□□ -1.55
LMO4P61968 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 MIR6811-201ENST00000620409 58 ntBASIC5.39□□□□□ -1.55
LMO4P61968 AP001264.1-201ENST00000620602 703 ntBASIC5.39□□□□□ -1.55
LMO4P61968 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.39□□□□□ -1.55
LMO4P61968 AP001052.1-201ENST00000626421 99 ntBASIC5.39□□□□□ -1.55
LMO4P61968 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 AC007993.1-201ENST00000621298 2430 ntBASIC5.39□□□□□ -1.55
LMO4P61968 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.38□□□□□ -1.55
LMO4P61968 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC5.38□□□□□ -1.55
LMO4P61968 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC5.38□□□□□ -1.55
LMO4P61968 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 AL035422.1-201ENST00000414193 397 ntBASIC5.38□□□□□ -1.55
LMO4P61968 MTND2P12-201ENST00000417560 1252 ntBASIC5.38□□□□□ -1.55
LMO4P61968 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.38□□□□□ -1.55
LMO4P61968 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 OSTCP4-201ENST00000424397 449 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 Z68868.1-201ENST00000429048 544 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.38□□□□□ -1.55
LMO4P61968 RPL23AP64-201ENST00000469465 435 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 AC063943.2-201ENST00000495697 534 ntBASIC5.38□□□□□ -1.55
LMO4P61968 RPL5P11-201ENST00000498068 893 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 AC083906.1-201ENST00000509298 406 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.38□□□□□ -1.55
LMO4P61968 ZNF519P4-201ENST00000514008 125 ntBASIC5.38□□□□□ -1.55
LMO4P61968 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 AC004232.2-201ENST00000574245 821 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.38□□□□□ -1.55
LMO4P61968 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms