Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RAB5CP1-201ENST00000395972 580 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 RN7SKP254-201ENST00000410685 310 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 RN7SKP85-201ENST00000411349 318 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 SNX18P13-201ENST00000412442 529 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 BX664727.1-201ENST00000416024 466 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 AC005005.2-201ENST00000420779 380 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 RPSAP1-201ENST00000421328 880 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 AC241520.1-201ENST00000422654 1099 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 MTND2P5-201ENST00000432656 1006 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 MTND2P22-201ENST00000444325 1033 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 AL034399.1-201ENST00000451535 380 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.32□□□□□ -1.4
CLRN1P58418 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 PABPC1P10-201ENST00000464731 381 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 RPS14P8-201ENST00000478778 369 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AC131233.1-201ENST00000479200 955 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 CHCHD2P7-201ENST00000508008 452 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AC093770.1-201ENST00000511559 571 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.32□□□□□ -1.4
CLRN1P58418 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 ULK4P1-202ENST00000565174 503 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 EIF1P5-201ENST00000585002 234 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 BNIP3P24-201ENST00000593398 557 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 AC008751.2-201ENST00000597885 980 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 AL157392.4-201ENST00000609756 345 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 AC078880.5-201ENST00000617845 421 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 pRNA.9-201ENST00000618609 89 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.32□□□□□ -1.4
CLRN1P58418 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 TPTE2P2-201ENST00000403471 1466 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.32□□□□□ -1.4
CLRN1P58418 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 AC100810.3-201ENST00000633189 2240 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.31□□□□□ -1.4
CLRN1P58418 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.31□□□□□ -1.4
CLRN1P58418 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 RPL10P16-201ENST00000325000 645 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 RN7SKP107-201ENST00000364157 290 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 RPL12P1-201ENST00000374520 498 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.31□□□□□ -1.4
CLRN1P58418 PTP4A1P7-201ENST00000423476 514 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 AL035246.1-201ENST00000433554 1255 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 ATP5LP4-201ENST00000434169 307 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLRN1P58418 AC093166.2-201ENST00000455969 1017 ntBASIC6.31□□□□□ -1.4
CLRN1P58418 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.31□□□□□ -1.4
CLRN1P58418 SNORA81.1-201ENST00000458922 177 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms