Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.1□□□□□ -1.27
SSR1P43307 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.1□□□□□ -1.27
SSR1P43307 AC024085.1-201ENST00000604299 432 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AL121782.1-201ENST00000611242 413 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AL445647.2-201ENST00000615170 130 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AC007347.2-201ENST00000623044 180 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AC073857.1-201ENST00000625082 1054 ntBASIC7.1□□□□□ -1.27
SSR1P43307 RACGAP1P-201ENST00000550663 1879 ntBASIC7.1□□□□□ -1.27
SSR1P43307 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
SSR1P43307 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 AP002512.4-202ENST00000641599 4530 ntBASIC7.1□□□□□ -1.27
SSR1P43307 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.1□□□□□ -1.27
SSR1P43307 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.1□□□□□ -1.27
SSR1P43307 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 AC096992.2-201ENST00000609553 1684 ntBASIC7.09□□□□□ -1.27
SSR1P43307 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSR1P43307 UGT2B27P-201ENST00000505092 1620 ntBASIC7.09□□□□□ -1.27
SSR1P43307 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.09□□□□□ -1.27
SSR1P43307 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
SSR1P43307 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSR1P43307 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSR1P43307 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSR1P43307 RPL24P4-201ENST00000326586 421 ntBASIC7.09□□□□□ -1.27
SSR1P43307 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSR1P43307 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSR1P43307 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SSR1P43307 RNA5SP176-201ENST00000390956 110 ntBASIC7.09□□□□□ -1.27
SSR1P43307 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.09□□□□□ -1.27
SSR1P43307 AC245452.2-201ENST00000435222 392 ntBASIC7.09□□□□□ -1.27
SSR1P43307 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.09□□□□□ -1.27
SSR1P43307 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.09□□□□□ -1.27
SSR1P43307 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.09□□□□□ -1.27
SSR1P43307 AC079193.1-201ENST00000460497 588 ntBASIC7.09□□□□□ -1.27
SSR1P43307 RN7SL492P-201ENST00000460700 295 ntBASIC7.09□□□□□ -1.27
SSR1P43307 RNA5SP278-201ENST00000517055 102 ntBASIC7.09□□□□□ -1.27
SSR1P43307 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.09□□□□□ -1.27
SSR1P43307 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.09□□□□□ -1.27
SSR1P43307 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.09□□□□□ -1.27
SSR1P43307 AC004232.1-201ENST00000571388 208 ntBASIC7.09□□□□□ -1.27
SSR1P43307 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.09□□□□□ -1.27
SSR1P43307 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.09□□□□□ -1.28
SSR1P43307 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
SSR1P43307 AC006213.6-201ENST00000623722 4179 ntBASIC7.09□□□□□ -1.28
SSR1P43307 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 AC027575.3-201ENST00000583058 2747 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AC232271.1-201ENST00000602455 2715 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AC009120.2-204ENST00000621548 2032 ntBASIC7.08□□□□□ -1.28
SSR1P43307 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.08□□□□□ -1.28
SSR1P43307 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SSR1P43307 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.08□□□□□ -1.28
SSR1P43307 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 AC096537.2-201ENST00000413707 714 ntBASIC7.08□□□□□ -1.28
SSR1P43307 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.08□□□□□ -1.28
SSR1P43307 AC091492.1-201ENST00000419844 272 ntBASIC7.08□□□□□ -1.28
SSR1P43307 MGAT2P2-201ENST00000427194 797 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.08□□□□□ -1.28
SSR1P43307 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.08□□□□□ -1.28
SSR1P43307 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 RPL23AP28-201ENST00000448062 470 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AL354714.5-201ENST00000450131 590 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.08□□□□□ -1.28
SSR1P43307 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.08□□□□□ -1.28
SSR1P43307 RN7SL390P-201ENST00000470634 284 ntBASIC7.08□□□□□ -1.28
SSR1P43307 RPS16P9-201ENST00000477220 427 ntBASIC7.08□□□□□ -1.28
SSR1P43307 RN7SL654P-201ENST00000479178 292 ntBASIC7.08□□□□□ -1.28
SSR1P43307 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 IGKV1D-32-201ENST00000517449 318 ntBASIC7.08□□□□□ -1.28
SSR1P43307 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.08□□□□□ -1.28
SSR1P43307 OR4A6P-201ENST00000534364 970 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.08□□□□□ -1.28
SSR1P43307 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.08□□□□□ -1.28
SSR1P43307 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.08□□□□□ -1.28
SSR1P43307 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 OR1N1-202ENST00000619659 939 ntBASIC7.08□□□□□ -1.28
SSR1P43307 AC005753.1-201ENST00000623837 618 ntBASIC7.08□□□□□ -1.28
SSR1P43307 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 AC007485.2-201ENST00000623493 1667 ntBASIC7.08□□□□□ -1.28
SSR1P43307 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.08□□□□□ -1.28
SSR1P43307 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSR1P43307 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.08□□□□□ -1.28
SSR1P43307 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms