Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORA43.3-201ENST00000517240 103 ntBASIC6.8□□□□□ -1.32
HTTP42858 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 AC096861.1-201ENST00000616652 240 ntBASIC6.8□□□□□ -1.32
HTTP42858 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
HTTP42858 AC061975.7-201ENST00000592016 2692 ntBASIC6.8□□□□□ -1.32
HTTP42858 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.8□□□□□ -1.32
HTTP42858 RN7SKP166-201ENST00000410812 305 ntBASIC6.8□□□□□ -1.32
HTTP42858 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.8□□□□□ -1.32
HTTP42858 AL645933.2-201ENST00000606743 1207 ntBASIC6.8□□□□□ -1.32
HTTP42858 AC008115.4-201ENST00000619780 775 ntBASIC6.8□□□□□ -1.32
HTTP42858 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 AL662795.2-201ENST00000624252 3706 ntBASIC6.8□□□□□ -1.32
HTTP42858 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.8□□□□□ -1.32
HTTP42858 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.79□□□□□ -1.32
HTTP42858 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 MIR141-201ENST00000384975 95 ntBASIC6.79□□□□□ -1.32
HTTP42858 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HTTP42858 AL645733.1-201ENST00000402250 217 ntBASIC6.79□□□□□ -1.32
HTTP42858 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.79□□□□□ -1.32
HTTP42858 AC113412.1-201ENST00000425840 504 ntBASIC6.79□□□□□ -1.32
HTTP42858 MORF4-201ENST00000447135 971 ntBASIC6.79□□□□□ -1.32
HTTP42858 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.79□□□□□ -1.32
HTTP42858 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 AC010624.4-201ENST00000597606 1351 ntBASIC6.79□□□□□ -1.32
HTTP42858 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 RPS7P3-201ENST00000443360 580 ntBASIC6.79□□□□□ -1.32
HTTP42858 GAPDHP23-201ENST00000444823 993 ntBASIC6.79□□□□□ -1.32
HTTP42858 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.79□□□□□ -1.32
HTTP42858 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 AC100827.5-201ENST00000615883 426 ntBASIC6.79□□□□□ -1.32
HTTP42858 AC105105.5-201ENST00000622635 1294 ntBASIC6.79□□□□□ -1.32
HTTP42858 AC087565.3-203ENST00000641018 837 ntBASIC6.79□□□□□ -1.32
HTTP42858 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 AP001541.1-201ENST00000623322 1904 ntBASIC6.79□□□□□ -1.32
HTTP42858 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 GUCY1B2-204ENST00000531898 1979 ntBASIC6.79□□□□□ -1.32
HTTP42858 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HTTP42858 RNA5SP333-201ENST00000363466 118 ntBASIC6.79□□□□□ -1.32
HTTP42858 RNA5SP334-201ENST00000364825 118 ntBASIC6.79□□□□□ -1.32
HTTP42858 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.79□□□□□ -1.32
HTTP42858 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.79□□□□□ -1.32
HTTP42858 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.79□□□□□ -1.32
HTTP42858 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.79□□□□□ -1.32
HTTP42858 AC183089.2-201ENST00000637931 916 ntBASIC6.79□□□□□ -1.32
HTTP42858 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.78□□□□□ -1.32
HTTP42858 AC007485.2-201ENST00000623493 1667 ntBASIC6.78□□□□□ -1.32
HTTP42858 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 OR11H13P-201ENST00000359695 979 ntBASIC6.78□□□□□ -1.32
HTTP42858 RNU1-46P-201ENST00000384425 164 ntBASIC6.78□□□□□ -1.32
HTTP42858 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HTTP42858 AC096537.2-201ENST00000413707 714 ntBASIC6.78□□□□□ -1.32
HTTP42858 MRPL53P1-201ENST00000414323 319 ntBASIC6.78□□□□□ -1.32
HTTP42858 CYCSP12-201ENST00000437729 300 ntBASIC6.78□□□□□ -1.32
HTTP42858 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.78□□□□□ -1.32
HTTP42858 LRRC37A14P-201ENST00000452297 462 ntBASIC6.78□□□□□ -1.32
HTTP42858 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms