Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 AC067942.1-201ENST00000488045 1493 ntBASIC6.59□□□□□ -1.36
CDH3P22223 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CDH3P22223 AL591848.4-201ENST00000567832 3472 ntBASIC6.59□□□□□ -1.36
CDH3P22223 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CDH3P22223 AC005618.1-201ENST00000606901 3148 ntBASIC6.59□□□□□ -1.36
CDH3P22223 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH3P22223 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 MAPK10-379ENST00000642013 1385 ntBASIC6.58□□□□□ -1.36
CDH3P22223 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 AC104837.1-201ENST00000444644 1587 ntBASIC6.58□□□□□ -1.36
CDH3P22223 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 XKRY2-202ENST00000623874 1581 ntBASIC6.58□□□□□ -1.36
CDH3P22223 XKRY-202ENST00000624960 1581 ntBASIC6.58□□□□□ -1.36
CDH3P22223 NCOA4P2-201ENST00000340589 1813 ntBASIC6.58□□□□□ -1.36
CDH3P22223 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CDH3P22223 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CDH3P22223 RPL9P21-201ENST00000392269 505 ntBASIC6.58□□□□□ -1.36
CDH3P22223 AL034417.1-201ENST00000399343 800 ntBASIC6.58□□□□□ -1.36
CDH3P22223 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 CYCSP17-201ENST00000407870 315 ntBASIC6.58□□□□□ -1.36
CDH3P22223 RPSAP60-201ENST00000415403 880 ntBASIC6.58□□□□□ -1.36
CDH3P22223 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 RPEP4-201ENST00000437636 602 ntBASIC6.58□□□□□ -1.36
CDH3P22223 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.58□□□□□ -1.36
CDH3P22223 AC073476.1-201ENST00000452854 407 ntBASIC6.58□□□□□ -1.36
CDH3P22223 RN7SL37P-201ENST00000490461 307 ntBASIC6.58□□□□□ -1.36
CDH3P22223 RN7SL187P-201ENST00000495587 303 ntBASIC6.58□□□□□ -1.36
CDH3P22223 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.58□□□□□ -1.36
CDH3P22223 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 AC137695.1-201ENST00000604126 489 ntBASIC6.58□□□□□ -1.36
CDH3P22223 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH3P22223 AL352984.2-202ENST00000613699 155 ntBASIC6.58□□□□□ -1.36
CDH3P22223 MIR6849-201ENST00000618543 69 ntBASIC6.58□□□□□ -1.36
CDH3P22223 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH3P22223 MIR6813-201ENST00000621638 56 ntBASIC6.58□□□□□ -1.36
CDH3P22223 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CDH3P22223 AC027559.1-201ENST00000636288 271 ntBASIC6.58□□□□□ -1.36
CDH3P22223 AC079248.1-201ENST00000427568 1546 ntBASIC6.58□□□□□ -1.36
CDH3P22223 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CDH3P22223 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH3P22223 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 AC120036.2-201ENST00000509729 1474 ntBASIC6.58□□□□□ -1.36
CDH3P22223 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CDH3P22223 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH3P22223 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH3P22223 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 RPS2P45-201ENST00000469997 2057 ntBASIC6.57□□□□□ -1.36
CDH3P22223 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH3P22223 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH3P22223 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
CDH3P22223 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CDH3P22223 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.57□□□□□ -1.36
CDH3P22223 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.57□□□□□ -1.36
CDH3P22223 AL121578.1-201ENST00000428051 892 ntBASIC6.57□□□□□ -1.36
CDH3P22223 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 AL590128.1-201ENST00000433407 286 ntBASIC6.57□□□□□ -1.36
CDH3P22223 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH3P22223 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 E2F6P3-201ENST00000441743 743 ntBASIC6.57□□□□□ -1.36
CDH3P22223 AL034369.1-201ENST00000453808 477 ntBASIC6.57□□□□□ -1.36
CDH3P22223 MEF2AP1-201ENST00000454867 863 ntBASIC6.57□□□□□ -1.36
CDH3P22223 AC083806.1-201ENST00000468934 316 ntBASIC6.57□□□□□ -1.36
CDH3P22223 RN7SL259P-201ENST00000478499 253 ntBASIC6.57□□□□□ -1.36
CDH3P22223 AC026826.1-201ENST00000493002 361 ntBASIC6.57□□□□□ -1.36
CDH3P22223 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH3P22223 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH3P22223 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH3P22223 SETP17-201ENST00000534163 817 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms