Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM3P06753 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
TPM3P06753 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 RNA5SP114-201ENST00000363780 113 ntBASIC7.29□□□□□ -1.24
TPM3P06753 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 RNA5SP474-201ENST00000391234 90 ntBASIC7.29□□□□□ -1.24
TPM3P06753 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM3P06753 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM3P06753 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM3P06753 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 AL022237.1-201ENST00000446663 358 ntBASIC7.29□□□□□ -1.24
TPM3P06753 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM3P06753 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 RN7SL654P-201ENST00000479178 292 ntBASIC7.29□□□□□ -1.24
TPM3P06753 GAPDHP38-201ENST00000503632 1002 ntBASIC7.29□□□□□ -1.24
TPM3P06753 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM3P06753 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.29□□□□□ -1.24
TPM3P06753 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.29□□□□□ -1.24
TPM3P06753 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 BUB1P1-201ENST00000603541 607 ntBASIC7.29□□□□□ -1.24
TPM3P06753 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM3P06753 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.29□□□□□ -1.24
TPM3P06753 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM3P06753 AL132640.3-201ENST00000630473 177 ntBASIC7.29□□□□□ -1.24
TPM3P06753 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
TPM3P06753 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
TPM3P06753 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
TPM3P06753 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM3P06753 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 NEK2P2-201ENST00000438441 1338 ntBASIC7.28□□□□□ -1.24
TPM3P06753 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM3P06753 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM3P06753 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM3P06753 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
TPM3P06753 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
TPM3P06753 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
TPM3P06753 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM3P06753 AC009518.3-201ENST00000438972 253 ntBASIC7.28□□□□□ -1.24
TPM3P06753 AL096803.1-201ENST00000456921 1021 ntBASIC7.28□□□□□ -1.24
TPM3P06753 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM3P06753 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM3P06753 AC091965.3-201ENST00000506236 208 ntBASIC7.28□□□□□ -1.24
TPM3P06753 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM3P06753 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM3P06753 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
TPM3P06753 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM3P06753 AC090651.1-201ENST00000567865 634 ntBASIC7.28□□□□□ -1.24
TPM3P06753 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM3P06753 AC092960.1-201ENST00000604762 351 ntBASIC7.28□□□□□ -1.24
TPM3P06753 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 AC140479.2-201ENST00000421567 3130 ntBASIC7.28□□□□□ -1.24
TPM3P06753 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
TPM3P06753 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
TPM3P06753 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 ZNF806-201ENST00000438300 1774 ntBASIC7.28□□□□□ -1.24
TPM3P06753 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM3P06753 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM3P06753 AC083837.1-201ENST00000565297 2994 ntBASIC7.27□□□□□ -1.25
TPM3P06753 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM3P06753 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM3P06753 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM3P06753 AC023886.2-201ENST00000321285 411 ntBASIC7.27□□□□□ -1.25
TPM3P06753 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM3P06753 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.27□□□□□ -1.25
TPM3P06753 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM3P06753 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM3P06753 RPL23AP28-201ENST00000448062 470 ntBASIC7.27□□□□□ -1.25
TPM3P06753 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM3P06753 SNORA35.1-201ENST00000458908 128 ntBASIC7.27□□□□□ -1.25
TPM3P06753 PPP1R2P6-201ENST00000478565 588 ntBASIC7.27□□□□□ -1.25
TPM3P06753 RPL7AP23-201ENST00000482625 776 ntBASIC7.27□□□□□ -1.25
TPM3P06753 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.27□□□□□ -1.25
TPM3P06753 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.27□□□□□ -1.25
TPM3P06753 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM3P06753 MTCYBP44-201ENST00000514835 823 ntBASIC7.27□□□□□ -1.25
TPM3P06753 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms